Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pnkd (PNKD metallo-beta-lactamase domain containing) Rattus norvegicus
Symbol: Pnkd
Name: PNKD metallo-beta-lactamase domain containing
RGD ID: 2300155
Description: Predicted to have hydroxyacylglutathione hydrolase activity and metal ion binding activity. Predicted to be involved in modulation of chemical synaptic transmission; neuromuscular process controlling posture; and regulation of dopamine metabolic process. Predicted to localize to membrane and mitochondrion. Human ortholog(s) of this gene implicated in paroxysmal nonkinesigenic dyskinesia 1. Orthologous to human PNKD (PNKD metallo-beta-lactamase domain containing); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: MGC188259; Mr-1; myofibrillogenesis regulator 1; paroxysmal nonkinesigenic dyskinesia; paroxysmal nonkinesiogenic dyskinesia; PNKD, MBL domain containing; probable hydrolase PNKD
Homo sapiens (human) : PNKD (PNKD metallo-beta-lactamase domain containing)  HGNC  Alliance
Mus musculus (house mouse) : Pnkd (paroxysmal nonkinesiogenic dyskinesia)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pnkd (PNKD metallo-beta-lactamase domain containing)
Pan paniscus (bonobo/pygmy chimpanzee) : PNKD (PNKD metallo-beta-lactamase domain containing)
Canis lupus familiaris (dog) : PNKD (PNKD metallo-beta-lactamase domain containing)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pnkd (PNKD metallo-beta-lactamase domain containing)
Sus scrofa (pig) : PNKD (PNKD metallo-beta-lactamase domain containing)
Chlorocebus sabaeus (African green monkey) : PNKD (PNKD metallo-beta-lactamase domain containing)
Heterocephalus glaber (naked mole-rat) : Pnkd (PNKD metallo-beta-lactamase domain containing)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0981,566,074 - 81,634,531 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,566,074 - 81,634,534 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0981,332,155 - 81,400,726 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4973,611,610 - 73,697,690 (+)NCBIRGSC3.4rn4RGSC3.4
Celera973,445,105 - 73,513,517 (+)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Pnkd
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2300155
Created: 2008-09-06
Species: Rattus norvegicus
Last Modified: 2020-10-13
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.