Pnkd (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 9 | 83,317,757 - 83,386,263 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 75,868,620 - 75,937,126 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 75,867,468 - 75,937,124 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 84,314,159 - 84,382,631 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 89,443,080 - 89,511,569 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 87,829,296 - 87,897,762 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 81,566,074 - 81,634,531 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 81,566,074 - 81,634,534 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 81,332,155 - 81,400,726 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 73,611,610 - 73,697,690 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 9 | 73,445,105 - 73,513,517 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q33 | NCBI | | | | |
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PNKD (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 218,270,519 - 218,346,793 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 218,269,651 - 218,346,793 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 219,135,242 - 219,211,516 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 218,843,359 - 218,919,760 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 2 | 212,901,694 - 212,978,127 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q35 | NCBI | | | | | HuRef | 2 | 210,988,212 - 211,064,476 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 219,141,604 - 219,218,160 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 218,756,220 - 218,832,888 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pnkd (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 74,323,757 - 74,392,851 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 74,324,089 - 74,392,853 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 74,284,599 - 74,353,692 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 74,284,930 - 74,353,694 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 74,331,608 - 74,400,266 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 74,218,241 - 74,286,899 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 74,846,387 - 74,914,676 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | C3 | NCBI | | | | | cM Map | 1 | 38.53 | NCBI | | | | |
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Pnkd (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955453 | 15,030,436 - 15,104,084 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955453 | 15,030,436 - 15,104,084 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PNKD (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 13 | 120,902,654 - 120,979,020 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 120,917,602 - 120,993,993 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 105,529,775 - 105,606,207 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 224,127,504 - 224,204,046 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2B | 224,127,504 - 224,204,046 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PNKD (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 37 | 24,948,763 - 25,008,542 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 37 | 24,948,932 - 25,005,144 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 37 | 25,769,014 - 25,828,461 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 37 | 24,964,913 - 25,024,609 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 37 | 24,964,994 - 25,024,608 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 37 | 24,870,239 - 24,929,662 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 37 | 24,804,494 - 24,863,959 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 37 | 24,824,128 - 24,883,632 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pnkd (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PNKD (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 15 | 120,387,113 - 120,410,476 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 15 | 120,345,541 - 120,411,648 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 15 | 133,367,669 - 133,370,492 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PNKD (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 10 | 104,152,005 - 104,227,624 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 10 | 104,152,081 - 104,229,219 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 95,173,913 - 95,249,814 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pnkd (Heterocephalus glaber - naked mole-rat) |
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