Gm8256 (predicted gene 8256) - Rat Genome Database

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Gene: Gm8256 (predicted gene 8256) Mus musculus
Analyze
Symbol: Gm8256
Name: predicted gene 8256
RGD ID: 2299372
MGI Page MGI
Description:
Type: protein-coding (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: MODEL
Previously known as: 666723; disks large homolog 5-like; predicted gene, 666723
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391444,850,982 - 44,856,353 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1444,852,149 - 44,854,576 (+)EnsemblGRCm39 Ensembl
GRCm381444,613,568 - 44,618,896 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1444,613,533 - 44,618,904 (+)EnsemblGRCm38mm10GRCm38
MGSCv371445,233,243 - 45,244,382 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361443,535,441 - 43,540,905 (+)NCBIMGSCv36mm8
Celera1439,448,943 - 39,454,411 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.56NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm8256
205 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:116
Count of miRNA genes:112
Interacting mature miRNAs:115
Transcripts:ENSMUST00000169178
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_036159008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC160336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000169178
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,852,149 - 44,854,576 (+)Ensembl
GRCm38.p6 Ensembl1444,614,692 - 44,617,119 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227964
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,854,393 - 44,856,361 (+)Ensembl
GRCm38.p6 Ensembl1444,616,936 - 44,618,904 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228692
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,850,990 - 44,854,502 (+)Ensembl
GRCm38.p6 Ensembl1444,613,533 - 44,617,045 (+)Ensembl
RefSeq Acc Id: XM_036159008   ⟹   XP_036014901
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391444,850,982 - 44,856,353 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_036014901 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_036014901   ⟸   XM_036159008


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000091605 Ensembl
MGD MGI:3779791 ENTREZGENE
NCBI Gene 666723 ENTREZGENE
PhenoGen Gm8256 PhenoGen