Gm4707 (predicted gene 4707) - Rat Genome Database

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Gene: Gm4707 (predicted gene 4707) Mus musculus
Analyze
Symbol: Gm4707
Name: predicted gene 4707
RGD ID: 2299234
MGI Page MGI
Description:
Type: pseudo
RefSeq Status: INFERRED
Also known as: 100043879; predicted gene, 100043879
Related Functional Gene: Atp5b  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391771,765,173 - 71,766,894 (-)NCBIGRCm39mm39
GRCm39 Ensembl1771,765,322 - 71,766,913 (-)Ensembl
GRCm381771,458,178 - 71,459,899 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1771,458,327 - 71,459,918 (-)EnsemblGRCm38mm10GRCm38
MGSCv371771,807,516 - 71,808,145 (-)NCBIGRCm37mm9NCBIm37
MGSCv371771,807,516 - 71,808,145 (-)NCBIGRCm37mm9NCBIm37
MGSCv361771,807,516 - 71,808,145 (-)NCBImm8
Celera1775,728,550 - 75,730,271 (-)NCBICelera
Cytogenetic Map17E1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Position Markers
AW549786  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381771,458,380 - 71,458,468UniSTSGRCm38
GRCm3810128,089,115 - 128,090,063UniSTSGRCm38
MGSCv371771,807,720 - 71,807,808UniSTSGRCm37
MGSCv3710127,526,171 - 127,527,119UniSTSGRCm37
Celera1775,728,752 - 75,728,840UniSTS
Celera10130,483,851 - 130,484,799UniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map10D3UniSTS
Whitehead/MRC_RH17832.51UniSTS
D17Wsu164e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381771,458,201 - 71,458,436UniSTSGRCm38
MGSCv371771,807,541 - 71,807,776UniSTSGRCm37
Celera1775,728,573 - 75,728,808UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17E1.3UniSTS
cM Map1742.5UniSTS
ATP5B  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381771,459,426 - 71,459,562UniSTSGRCm38
GRCm3810128,084,331 - 128,084,467UniSTSGRCm38
MGSCv371771,808,766 - 71,808,902UniSTSGRCm37
MGSCv3710127,521,387 - 127,521,523UniSTSGRCm37
Celera1775,729,798 - 75,729,934UniSTS
Celera10130,479,068 - 130,479,204UniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map10D3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
1300592Pcyts5_mplasmacytoma susceptibility 5 (mouse)Not determined173840588672405969Mouse
10755525Lymph2_mlymphocyte differential 2 (mouse)173849862572498625Mouse
10755534Lymph4_mlymphocyte differential 4 (mouse)173849862572498625Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4022744774227623Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174063218774632187Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174620000082100000Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined174989696283897108Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175145143085451617Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175145143085451617Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175680065690800808Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175680065690800808Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175680065690800808Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175680065690800808Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175680065690800808Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175680065690800808Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5722744780578347Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175722744793199751Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5728209491282202Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176199358194987271Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176199358194987271Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176357811994987271Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176490750994987271Mouse
14928308Manh82_mmandible shape 82 (mouse)176600781494987271Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176863389194987271Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177039377094987271Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177039377094987271Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177039377094987271Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177039377094987271Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:360
Count of miRNA genes:281
Interacting mature miRNAs:306
Transcripts:ENSMUST00000171504, ENSMUST00000180522, ENSMUST00000183937
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000171504
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1771,458,327 - 71,459,918 (-)Ensembl
RefSeq Acc Id: ENSMUST00000183937   ⟹   ENSMUSP00000139241
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1771,459,025 - 71,459,300 (-)Ensembl
RefSeq Acc Id: XM_001481180   ⟹   XP_001481230
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv371771,807,516 - 71,808,145 (-)RGD

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000091831 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000139241 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000183937 UniProtKB/TrEMBL
MGD MGI:3782887 ENTREZGENE
NCBI Gene Gm4707 ENTREZGENE
PhenoGen Gm4707 PhenoGen
UniProt V9GXN5_MOUSE UniProtKB/TrEMBL