CIMIP2C (ciliary microtubule inner protein 2C) - Rat Genome Database

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Gene: CIMIP2C (ciliary microtubule inner protein 2C) Homo sapiens
Analyze
Symbol: CIMIP2C
Name: ciliary microtubule inner protein 2C
RGD ID: 2298820
HGNC Page HGNC:27938
Description: Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C2orf70; chromosome 2 open reading frame 70; FAM166C; family with sequence similarity 166 member C; hypothetical protein LOC339778; UPF0573 protein C2orf70
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38226,562,587 - 26,579,524 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl226,562,585 - 26,579,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37226,785,455 - 26,802,392 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36226,638,985 - 26,655,899 (+)NCBINCBI36Build 36hg18NCBI36
Celera226,629,117 - 26,646,026 (+)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef226,524,922 - 26,541,831 (+)NCBIHuRef
CHM1_1226,715,533 - 26,732,444 (+)NCBICHM1_1
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14702039   PMID:21630459   PMID:36191189   PMID:37327785  


Genomics

Comparative Map Data
CIMIP2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38226,562,587 - 26,579,524 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl226,562,585 - 26,579,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37226,785,455 - 26,802,392 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36226,638,985 - 26,655,899 (+)NCBINCBI36Build 36hg18NCBI36
Celera226,629,117 - 26,646,026 (+)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef226,524,922 - 26,541,831 (+)NCBIHuRef
CHM1_1226,715,533 - 26,732,444 (+)NCBICHM1_1
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBIT2T-CHM13v2.0
Cimip2c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39530,623,395 - 30,641,433 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl530,623,391 - 30,641,432 (+)EnsemblGRCm39 Ensembl
GRCm38530,466,029 - 30,484,089 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl530,466,047 - 30,484,088 (+)EnsemblGRCm38mm10GRCm38
MGSCv37530,768,450 - 30,786,460 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36530,742,658 - 30,760,668 (+)NCBIMGSCv36mm8
Celera527,944,260 - 27,962,270 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map516.57NCBI
Cimip2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8631,625,187 - 31,643,500 (-)NCBIGRCr8
mRatBN7.2625,905,294 - 25,923,615 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,905,294 - 25,923,615 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx626,197,967 - 26,216,277 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0626,513,848 - 26,532,158 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,992,822 - 26,011,126 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0627,305,402 - 27,323,992 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,305,402 - 27,323,992 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0637,117,774 - 37,136,364 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,889,215 - 25,908,084 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera625,383,869 - 25,401,938 (-)NCBICelera
Cytogenetic Map6q14NCBI
Cimip2c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554698,588,900 - 8,604,337 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554698,588,820 - 8,603,333 (+)NCBIChiLan1.0ChiLan1.0
CIMIP2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21299,936,109 - 99,956,927 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A99,940,080 - 99,960,894 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A26,558,826 - 26,578,005 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A26,651,265 - 26,668,192 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A26,651,283 - 26,668,192 (+)Ensemblpanpan1.1panPan2
CIMIP2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11720,618,642 - 20,633,418 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1720,618,329 - 20,633,403 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1720,512,905 - 20,527,668 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01720,940,005 - 20,954,785 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1720,939,689 - 20,954,785 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11720,626,951 - 20,641,726 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01720,638,105 - 20,652,860 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01720,684,449 - 20,699,207 (+)NCBIUU_Cfam_GSD_1.0
Cimip2c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629264,927,300 - 64,943,438 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364935,896,206 - 5,912,182 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364935,896,206 - 5,912,182 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CIMIP2C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3112,458,916 - 112,474,437 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13112,458,914 - 112,474,431 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23119,458,324 - 119,473,737 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CIMIP2C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11481,059,408 - 81,077,554 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1481,057,764 - 81,076,400 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604531,071,037 - 31,089,094 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cimip2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247388,702,652 - 8,716,962 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CIMIP2C
6 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2p25.3-23.1(chr2:30141-31766749)x3 copy number gain See cases [RCV000052929] Chr2:30141..31766749 [GRCh38]
Chr2:30141..31991818 [GRCh37]
Chr2:20141..31845322 [NCBI36]
Chr2:2p25.3-23.1
pathogenic
GRCh38/hg38 2p25.3-16.1(chr2:66097-55570637)x3 copy number gain See cases [RCV000052933] Chr2:66097..55570637 [GRCh38]
Chr2:66097..55797773 [GRCh37]
Chr2:56097..55651277 [NCBI36]
Chr2:2p25.3-16.1
pathogenic
GRCh38/hg38 2p23.3(chr2:25759602-27297636)x3 copy number gain See cases [RCV000052629] Chr2:25759602..27297636 [GRCh38]
Chr2:25982471..27520504 [GRCh37]
Chr2:25835975..27374008 [NCBI36]
Chr2:2p23.3
uncertain significance
NM_001105519.1(C2orf70):c.408C>T (p.Pro136=) single nucleotide variant Malignant melanoma [RCV000060537] Chr2:26577575 [GRCh38]
Chr2:26800443 [GRCh37]
Chr2:26653947 [NCBI36]
Chr2:2p23.3
not provided
GRCh38/hg38 2p25.3-23.2(chr2:30341-28419664)x3 copy number gain See cases [RCV000135398] Chr2:30341..28419664 [GRCh38]
Chr2:30341..28642531 [GRCh37]
Chr2:20341..28496035 [NCBI36]
Chr2:2p25.3-23.2
pathogenic
GRCh38/hg38 2p23.3(chr2:25064306-27154398)x1 copy number loss See cases [RCV000137065] Chr2:25064306..27154398 [GRCh38]
Chr2:25287175..27377266 [GRCh37]
Chr2:25140679..27230770 [NCBI36]
Chr2:2p23.3
uncertain significance
GRCh38/hg38 2p25.3-22.3(chr2:12770-33711509)x3 copy number gain See cases [RCV000141829] Chr2:12770..33711509 [GRCh38]
Chr2:12770..33936576 [GRCh37]
Chr2:2770..33790080 [NCBI36]
Chr2:2p25.3-22.3
pathogenic
GRCh38/hg38 2p25.1-11.2(chr2:7495123-87705899)x3 copy number gain See cases [RCV000141494] Chr2:7495123..87705899 [GRCh38]
Chr2:7635254..88005418 [GRCh37]
Chr2:7552705..87786533 [NCBI36]
Chr2:2p25.1-11.2
benign
GRCh38/hg38 2p24.1-23.2(chr2:22579652-28525186)x1 copy number loss See cases [RCV000142071] Chr2:22579652..28525186 [GRCh38]
Chr2:22802524..28748053 [GRCh37]
Chr2:22656029..28601557 [NCBI36]
Chr2:2p24.1-23.2
pathogenic
GRCh38/hg38 2p25.3-21(chr2:236816-45983232)x3 copy number gain See cases [RCV000143682] Chr2:236816..45983232 [GRCh38]
Chr2:236816..46210371 [GRCh37]
Chr2:226816..46063875 [NCBI36]
Chr2:2p25.3-21
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p23.3(chr2:26592685-27262646)x3 copy number gain See cases [RCV000448086] Chr2:26592685..27262646 [GRCh37]
Chr2:2p23.3
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p24.1-16.3(chr2:22665048-52850368)x3 copy number gain not provided [RCV000752875] Chr2:22665048..52850368 [GRCh37]
Chr2:2p24.1-16.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p23.3(chr2:26796310-26804143)x3 copy number gain not provided [RCV000740356] Chr2:26796310..26804143 [GRCh37]
Chr2:2p23.3
benign
GRCh37/hg19 2p23.3(chr2:26669414-26803419)x1 copy number loss not provided [RCV000848846] Chr2:26669414..26803419 [GRCh37]
Chr2:2p23.3
uncertain significance
GRCh37/hg19 2p23.3-21(chr2:24601818-43466284)x3 copy number gain See cases [RCV001581099] Chr2:24601818..43466284 [GRCh37]
Chr2:2p23.3-21
pathogenic
GRCh37/hg19 2p23.3-21(chr2:24881528-43460021)x3 copy number gain not provided [RCV001532444] Chr2:24881528..43460021 [GRCh37]
Chr2:2p23.3-21
likely pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p23.3(chr2:26592685-27262646) copy number gain not specified [RCV002053078] Chr2:26592685..27262646 [GRCh37]
Chr2:2p23.3
uncertain significance
NC_000002.11:g.(?_24443763)_(27746306_?)dup duplication Short-rib thoracic dysplasia 10 with or without polydactyly [RCV001911738] Chr2:24443763..27746306 [GRCh37]
Chr2:2p23.3
uncertain significance
NC_000002.11:g.(?_24443763)_(29022169_?)dup duplication Tatton-Brown-Rahman overgrowth syndrome [RCV003113871]|not provided [RCV003113870] Chr2:24443763..29022169 [GRCh37]
Chr2:2p23.3-23.2
uncertain significance|no classifications from unflagged records
NC_000002.11:g.(?_24443763)_(30143525_?)dup duplication not provided [RCV003113441] Chr2:24443763..30143525 [GRCh37]
Chr2:2p23.3-23.1
uncertain significance
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13
pathogenic
GRCh37/hg19 2p25.3-22.3(chr2:706460-35523639)x3 copy number gain not provided [RCV002473946] Chr2:706460..35523639 [GRCh37]
Chr2:2p25.3-22.3
pathogenic
GRCh37/hg19 2p25.3-22.3(chr2:12771-35541353)x3 copy number gain See cases [RCV004442780] Chr2:12771..35541353 [GRCh37]
Chr2:2p25.3-22.3
pathogenic
NM_001105519.3(CIMIP2C):c.124G>A (p.Gly42Ser) single nucleotide variant not specified [RCV004551065] Chr2:26575951 [GRCh38]
Chr2:26798819 [GRCh37]
Chr2:2p23.3
uncertain significance
NM_001105519.3(CIMIP2C):c.134C>A (p.Thr45Asn) single nucleotide variant not specified [RCV004551066] Chr2:26575961 [GRCh38]
Chr2:26798829 [GRCh37]
Chr2:2p23.3
uncertain significance
NM_001105519.3(CIMIP2C):c.151G>T (p.Asp51Tyr) single nucleotide variant not specified [RCV004551067] Chr2:26575978 [GRCh38]
Chr2:26798846 [GRCh37]
Chr2:2p23.3
uncertain significance
NM_001105519.3(CIMIP2C):c.335C>T (p.Thr112Met) single nucleotide variant not specified [RCV004551068] Chr2:26576162 [GRCh38]
Chr2:26799030 [GRCh37]
Chr2:2p23.3
uncertain significance
NM_001105519.3(CIMIP2C):c.406C>T (p.Pro136Ser) single nucleotide variant not specified [RCV004551069] Chr2:26577573 [GRCh38]
Chr2:26800441 [GRCh37]
Chr2:2p23.3
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:768
Count of miRNA genes:406
Interacting mature miRNAs:428
Transcripts:ENST00000329615, ENST00000409392, ENST00000453368, ENST00000479453
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH99278  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37226,798,829 - 26,799,014UniSTSGRCh37
Build 36226,652,333 - 26,652,518RGDNCBI36
Celera226,642,460 - 26,642,645RGD
Cytogenetic Map2p23.3UniSTS
HuRef226,538,265 - 26,538,450UniSTS
GeneMap99-GB4 RH Map289.82UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
827 2232 2085 1824 4514 1430 1918 1 340 541 187 1660 4701 4231 20 3602 1 732 1509 1477 166 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001105519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011532810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011532811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017003966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047444118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054341722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007073116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA725022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA758869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC015977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC108070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK091483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX114846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY021315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000329615   ⟹   ENSP00000332875
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl226,562,587 - 26,579,524 (+)Ensembl
Ensembl Acc Id: ENST00000409392   ⟹   ENSP00000386615
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl226,562,585 - 26,579,532 (+)Ensembl
Ensembl Acc Id: ENST00000453368   ⟹   ENSP00000395924
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl226,576,126 - 26,579,524 (+)Ensembl
Ensembl Acc Id: ENST00000479453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl226,563,035 - 26,579,529 (+)Ensembl
RefSeq Acc Id: NM_001105519   ⟹   NP_001098989
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
GRCh37226,785,427 - 26,802,395 (+)NCBI
Build 36226,638,985 - 26,655,899 (+)NCBI Archive
Celera226,629,117 - 26,646,026 (+)RGD
HuRef226,524,922 - 26,541,831 (+)RGD
CHM1_1226,715,479 - 26,732,449 (+)NCBI
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001322426   ⟹   NP_001309355
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
CHM1_1226,715,479 - 26,732,449 (+)NCBI
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011532810   ⟹   XP_011531112
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011532811   ⟹   XP_011531113
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,572,827 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017003962   ⟹   XP_016859451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017003963   ⟹   XP_016859452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017003964   ⟹   XP_016859453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017003965   ⟹   XP_016859454
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017003966   ⟹   XP_016859455
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047444117   ⟹   XP_047300073
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
RefSeq Acc Id: XM_047444118   ⟹   XP_047300074
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,572,832 - 26,579,524 (+)NCBI
RefSeq Acc Id: XM_054341714   ⟹   XP_054197689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341715   ⟹   XP_054197690
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341716   ⟹   XP_054197691
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341717   ⟹   XP_054197692
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341718   ⟹   XP_054197693
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,611,975 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341719   ⟹   XP_054197694
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341720   ⟹   XP_054197695
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,613,274 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341721   ⟹   XP_054197696
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: XM_054341722   ⟹   XP_054197697
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,611,980 - 26,618,672 (+)NCBI
RefSeq Acc Id: XR_007073116
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38226,562,587 - 26,579,524 (+)NCBI
RefSeq Acc Id: XR_008486355
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0226,601,745 - 26,618,672 (+)NCBI
RefSeq Acc Id: NP_001098989   ⟸   NM_001105519
- Peptide Label: isoform 1
- UniProtKB: A6NJV1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011531112   ⟸   XM_011532810
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011531113   ⟸   XM_011532811
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: NP_001309355   ⟸   NM_001322426
- Peptide Label: isoform 2
- UniProtKB: B8ZZ55 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016859453   ⟸   XM_017003964
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016859455   ⟸   XM_017003966
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_016859454   ⟸   XM_017003965
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_016859451   ⟸   XM_017003962
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016859452   ⟸   XM_017003963
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSP00000395924   ⟸   ENST00000453368
Ensembl Acc Id: ENSP00000332875   ⟸   ENST00000329615
Ensembl Acc Id: ENSP00000386615   ⟸   ENST00000409392
RefSeq Acc Id: XP_047300073   ⟸   XM_047444117
- Peptide Label: isoform X7
RefSeq Acc Id: XP_047300074   ⟸   XM_047444118
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054197689   ⟸   XM_054341714
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054197694   ⟸   XM_054341719
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054197691   ⟸   XM_054341716
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054197692   ⟸   XM_054341717
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054197696   ⟸   XM_054341721
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054197690   ⟸   XM_054341715
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054197693   ⟸   XM_054341718
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054197697   ⟸   XM_054341722
- Peptide Label: isoform X7
RefSeq Acc Id: XP_054197695   ⟸   XM_054341720
- Peptide Label: isoform X6

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A6NJV1-F1-model_v2 AlphaFold A6NJV1 1-201 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:27938 AgrOrtholog
COSMIC CIMIP2C COSMIC
Ensembl Genes ENSG00000173557 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000329615 ENTREZGENE
  ENST00000329615.4 UniProtKB/Swiss-Prot
  ENST00000409392 ENTREZGENE
  ENST00000409392.5 UniProtKB/TrEMBL
  ENST00000453368.1 UniProtKB/TrEMBL
GTEx ENSG00000173557 GTEx
HGNC ID HGNC:27938 ENTREZGENE
Human Proteome Map CIMIP2C Human Proteome Map
InterPro CIMIP2C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPF0573/UPF0605 UniProtKB/Swiss-Prot
KEGG Report hsa:339778 UniProtKB/Swiss-Prot
NCBI Gene 339778 ENTREZGENE
PANTHER PROTEIN FAM166C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPF0573 PROTEIN C2ORF70 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF2475 UniProtKB/Swiss-Prot
PharmGKB PA166352422 PharmGKB
UniProt A6NJV1 ENTREZGENE
  B8ZZ55 ENTREZGENE, UniProtKB/TrEMBL
  CB070_HUMAN UniProtKB/Swiss-Prot
  H7C0N2_HUMAN UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-01 CIMIP2C  ciliary microtubule inner protein 2C  FAM166C  family with sequence similarity 166 member C  Symbol and/or name change 19259463 PROVISIONAL
2019-09-12 FAM166C  family with sequence similarity 166 member C  C2orf70  chromosome 2 open reading frame 70  Symbol and/or name change 5135510 APPROVED