Gm6992 (predicted gene 6992) - Rat Genome Database

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Gene: Gm6992 (predicted gene 6992) Mus musculus
Analyze
Symbol: Gm6992
Name: predicted gene 6992
RGD ID: 2295303
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG629656
Related Functional Gene: Pkm  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391231,068,107 - 31,070,117 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1231,068,217 - 31,069,823 (+)EnsemblGRCm39 Ensembl
GRCm381231,018,108 - 31,020,118 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1231,018,218 - 31,019,824 (+)EnsemblGRCm38mm10GRCm38
MGSCv371231,703,028 - 31,704,883 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361231,604,164 - 31,605,945 (+)NCBIMGSCv36mm8
Celera1232,470,403 - 32,472,240 (+)NCBICelera
Cytogenetic Map12A2NCBI
cM Map1213.04NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:12904583  


Genomics

Variants

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Variants in Gm6992
66 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121062064244620809Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
4141516slwr_mslowlearner (mouse)Not determined1239247546392614Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121514733149147331Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121615000147746783Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
14746972Manh72_mmandible shape 72 (mouse)121061528144615281Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse

Markers in Region
Pkm2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381231,019,303 - 31,020,129UniSTSGRCm38
GRCm381286,714,983 - 86,715,823UniSTSGRCm38
MGSCv371231,704,168 - 31,704,994UniSTSGRCm37
MGSCv371288,055,933 - 88,056,773UniSTSGRCm37
Celera1288,177,035 - 88,177,875UniSTS
Celera1232,471,525 - 32,472,351UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map9BUniSTS
cM Map952.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_018315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC155293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000217973
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1231,068,217 - 31,069,823 (+)Ensembl
GRCm38.p6 Ensembl1231,018,218 - 31,019,824 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000112546 Ensembl
MGD MGI:3647975 ENTREZGENE
NCBI Gene 629656 ENTREZGENE
PhenoGen Gm6992 PhenoGen