Gm7091 (predicted gene 7091) - Rat Genome Database

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Gene: Gm7091 (predicted gene 7091) Mus musculus
Analyze
Symbol: Gm7091
Name: predicted gene 7091
RGD ID: 2294739
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG632685
Related Functional Gene: Rps7  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X139,722,685 - 139,723,270 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX139,722,687 - 139,723,272 (-)EnsemblGRCm39 Ensembl
GRCm38X140,821,936 - 140,822,521 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX140,821,938 - 140,822,523 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X137,356,475 - 137,357,060 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X136,168,266 - 136,169,563 (-)NCBIMGSCv36mm8
CeleraX124,081,335 - 124,081,920 (-)NCBICelera
Cytogenetic MapXF1NCBI
cM MapX61.52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm7091
9 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:29
Interacting mature miRNAs:29
Transcripts:ENSMUST00000116438
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX120993165160213038Mouse
25314309Syncl5_msynaptonemal complex length 5 (mouse)X121909697152582996Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX125685149159685269Mouse
13824981Svwq2_mseminal vesicle weight QTL 2 (mouse)X128900749153782996Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX133540040165298595Mouse
1301276Tswt_mtestis weight (mouse)Not determinedX138376411150789338Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_017976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL672306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000116438
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX139,722,687 - 139,723,272 (-)Ensembl
GRCm38.p6 EnsemblX140,821,938 - 140,822,523 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000082165 Ensembl, ENTREZGENE
MGD MGI:3643894 ENTREZGENE
NCBI Gene 632685 ENTREZGENE
PhenoGen Gm7091 PhenoGen