Gm9435 (predicted gene 9435) - Rat Genome Database

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Gene: Gm9435 (predicted gene 9435) Mus musculus
Analyze
Symbol: Gm9435
Name: predicted gene 9435
RGD ID: 2294391
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG668991
Related Functional Gene: Rpl6  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X14,821,340 - 14,822,213 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX14,821,337 - 14,822,213 (-)EnsemblGRCm39 Ensembl
GRCm38X14,955,101 - 14,955,974 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX14,955,098 - 14,955,974 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X14,532,227 - 14,533,100 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X14,112,057 - 14,112,933 (-)NCBIMGSCv36mm8
CeleraX12,595,447 - 12,596,320 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX9.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm9435
9 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:32
Count of miRNA genes:32
Interacting mature miRNAs:32
Transcripts:ENSMUST00000120379
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302195Pbwg10_mpostnatal body weight growth 10 (mouse)Not determinedX126202173Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_017821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL808113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000120379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX14,821,337 - 14,822,213 (-)Ensembl
GRCm38.p6 EnsemblX14,955,098 - 14,955,974 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000081763 Ensembl, ENTREZGENE
MGD MGI:3645162 ENTREZGENE
NCBI Gene 668991 ENTREZGENE
PhenoGen Gm9435 PhenoGen