Gm11814 (predicted gene 11814) - Rat Genome Database

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Gene: Gm11814 (predicted gene 11814) Mus musculus
Analyze
Symbol: Gm11814
Name: predicted gene 11814
RGD ID: 2294175
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Ldha  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39410,438,335 - 10,439,841 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl410,438,815 - 10,439,743 (-)EnsemblGRCm39 Ensembl
GRCm38410,438,335 - 10,439,841 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl410,438,815 - 10,439,743 (-)EnsemblGRCm38mm10GRCm38
MGSCv37410,365,482 - 10,366,987 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36410,365,501 - 10,366,982 (-)NCBIMGSCv36mm8
Celera410,252,688 - 10,254,193 (-)NCBICelera
Cytogenetic Map4A1NCBI
cM Map44.64NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm11814
75 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:328
Count of miRNA genes:158
Interacting mature miRNAs:163
Transcripts:ENSMUST00000119515, ENSMUST00000177674
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11049579Lmr9b_mleishmaniasis resistance 9b (mouse)4120657234Mouse
11049580Lmr9a_mleishmaniasis resistance 9 (mouse)4120657234Mouse
1301274Lmr9_mleishmaniasis resistance 9 (mouse)Not determined4120657234Mouse
10412079Sm1_msusceptibility to Schistosoma mansoni infection 1 (mouse)Not determined4122955614Mouse
1301510Bbaa13_mB.burgdorferi-associated arthritis 13 (mouse)Not determined4126395649Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_012947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL732519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000119515
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl410,438,815 - 10,439,743 (-)Ensembl
GRCm38.p6 Ensembl410,438,815 - 10,439,743 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000084215 Ensembl
MGD MGI:3650512 ENTREZGENE
NCBI Gene 666840 ENTREZGENE
PhenoGen Gm11814 PhenoGen