Gm5586 (predicted gene 5586) - Rat Genome Database

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Gene: Gm5586 (predicted gene 5586) Mus musculus
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Symbol: Gm5586
Name: predicted gene 5586
RGD ID: 2294132
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG434127
Related Functional Gene: Rps3a1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39716,452,997 - 16,453,860 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl716,453,041 - 16,453,835 (-)EnsemblGRCm39 Ensembl
GRCm38716,719,072 - 16,719,935 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl716,719,116 - 16,719,910 (-)EnsemblGRCm38mm10GRCm38
MGSCv37717,304,421 - 17,305,284 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36715,877,582 - 15,878,466 (-)NCBIMGSCv36mm8
Celera713,917,553 - 13,918,416 (-)NCBICelera
Cytogenetic Map7A2NCBI
cM Map79.15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm5586
17 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_018990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC150681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000206264
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl716,453,041 - 16,453,835 (-)Ensembl
GRCm38.p6 Ensembl716,719,116 - 16,719,910 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000108366 Ensembl, ENTREZGENE
MGD MGI:3645853 ENTREZGENE
NCBI Gene 434127 ENTREZGENE
PhenoGen Gm5586 PhenoGen