Gm14730 (predicted gene 14730) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Gm14730 (predicted gene 14730) Mus musculus
Analyze
Symbol: Gm14730
Name: predicted gene 14730
RGD ID: 2294029
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X70,240,709 - 70,242,054 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX70,240,733 - 70,241,777 (+)EnsemblGRCm39 Ensembl
GRCm38X71,197,103 - 71,198,448 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX71,197,127 - 71,198,171 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X68,450,299 - 68,451,346 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X67,457,639 - 67,459,468 (+)NCBIMGSCv36mm8
CeleraX62,171,628 - 62,173,222 (+)NCBICelera
Cytogenetic MapXA7.2NCBI
cM MapX36.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14730
36 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:63
Count of miRNA genes:62
Interacting mature miRNAs:63
Transcripts:ENSMUST00000122378
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000122378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX70,240,733 - 70,241,777 (+)Ensembl
GRCm38.p6 EnsemblX71,197,127 - 71,198,171 (+)Ensembl
RefSeq Acc Id: XR_141408
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X71,197,124 - 71,198,171 (+)ENTREZGENE
cM MapX ENTREZGENE
RefSeq Acc Id: XR_142406
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
CeleraX62,171,628 - 62,173,222 (+)RGD

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000082262 Ensembl
MGD MGI:3705542 ENTREZGENE
NCBI Gene 667013 ENTREZGENE
PhenoGen Gm14730 PhenoGen