Gene-Chemical Interaction Annotations
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References
References - curated
Genomics
miRNA Target Status
Predicted Target Of
Summary Value | Count of predictions: | 324 | Count of miRNA genes: | 304 | Interacting mature miRNAs: | 317 | Transcripts: | ENST00000418938 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
Markers in Region
D1S1425 |
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Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPMLow: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | adipose tissue | appendage | entire extraembryonic component | |
High | ||||||||||||||||
Medium | 3 | 6 | 4 | 4 | 4 | 1 | 2 | 7 | 37 | 2 | 23 | |||||
Low | 208 | 4 | 113 | 30 | 143 | 25 | 552 | 15 | 533 | 163 | 332 | 172 | 12 | 5 | 388 | |
Below cutoff | 512 | 303 | 440 | 99 | 329 | 67 | 742 | 173 | 1196 | 114 | 248 | 632 | 35 | 211 | 442 | 1 |
Sequence
Nucleotide Sequences
RefSeq Acc Id: | ENST00000418938 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NR_003503 | ||||||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||||||||||||||
Position: |
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Sequence: |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
COSMIC | GGT8P | COSMIC |
Ensembl Genes | ENSG00000236969 | Ensembl |
GTEx | ENSG00000236969 | GTEx |
HGNC ID | HGNC:33438 | ENTREZGENE |
Human Proteome Map | GGT8P | Human Proteome Map |
NCBI Gene | 645367 | ENTREZGENE |