WDFY3-AS2 (WDFY3 antisense RNA 2) - Rat Genome Database

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Gene: WDFY3-AS2 (WDFY3 antisense RNA 2) Homo sapiens
Analyze
Symbol: WDFY3-AS2
Name: WDFY3 antisense RNA 2
RGD ID: 2290199
HGNC Page HGNC:21603
Description: INTERACTS WITH (+)-catechin; 3-isobutyl-1-methyl-7H-xanthine; acrylamide
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: C4orf12; FBI4; MGC120078; MGC120079; NCRNA00247
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38484,965,616 - 85,008,743 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl484,965,534 - 85,011,277 (+)EnsemblGRCh38hg38GRCh38
GRCh37485,886,769 - 85,929,896 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36486,105,897 - 86,107,224 (+)NCBINCBI36Build 36hg18NCBI36
Celera483,178,285 - 83,218,557 (+)NCBICelera
Cytogenetic Map4q21.23NCBI
HuRef481,630,166 - 81,670,376 (+)NCBIHuRef
CHM1_1485,865,149 - 85,905,346 (+)NCBICHM1_1
T2T-CHM13v2.0488,295,634 - 88,338,762 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12136098   PMID:12477932   PMID:14702039   PMID:15580561   PMID:16344560   PMID:31347170   PMID:32275336   PMID:32401758   PMID:32536038   PMID:36657277  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 4q21.21-22.3(chr4:80879777-94809447)x1 copy number loss See cases [RCV000134977] Chr4:80879777..94809447 [GRCh38]
Chr4:81800931..95730598 [GRCh37]
Chr4:82019955..95949621 [NCBI36]
Chr4:4q21.21-22.3		 pathogenic
GRCh38/hg38 4q21.23-21.3(chr4:84577519-86077547)x3 copy number gain See cases [RCV000135441] Chr4:84577519..86077547 [GRCh38]
Chr4:85498672..86998700 [GRCh37]
Chr4:85717696..87217724 [NCBI36]
Chr4:4q21.23-21.3		 pathogenic
GRCh38/hg38 4q21.21-21.23(chr4:79786514-85832807)x1 copy number loss See cases [RCV000136865] Chr4:79786514..85832807 [GRCh38]
Chr4:80707668..86753960 [GRCh37]
Chr4:80926692..86972984 [NCBI36]
Chr4:4q21.21-21.23		 pathogenic
GRCh38/hg38 4q21.23-22.1(chr4:84329551-87679204)x1 copy number loss See cases [RCV000136623] Chr4:84329551..87679204 [GRCh38]
Chr4:85250704..88600356 [GRCh37]
Chr4:85469728..88819380 [NCBI36]
Chr4:4q21.23-22.1		 pathogenic
GRCh38/hg38 4q21.21-24(chr4:80427023-100855441)x1 copy number loss See cases [RCV000137269] Chr4:80427023..100855441 [GRCh38]
Chr4:81348177..101776598 [GRCh37]
Chr4:81567201..101995621 [NCBI36]
Chr4:4q21.21-24		 pathogenic
GRCh38/hg38 4q13.3-21.3(chr4:72262258-86002147)x3 copy number gain See cases [RCV000138312] Chr4:72262258..86002147 [GRCh38]
Chr4:73127975..86923300 [GRCh37]
Chr4:73346839..87142324 [NCBI36]
Chr4:4q13.3-21.3		 pathogenic
GRCh38/hg38 4q21.23-22.2(chr4:84329551-93654474)x1 copy number loss See cases [RCV000139231] Chr4:84329551..93654474 [GRCh38]
Chr4:85250704..94575625 [GRCh37]
Chr4:85469728..94794648 [NCBI36]
Chr4:4q21.23-22.2		 likely benign
GRCh38/hg38 4q21.21-21.3(chr4:80043949-86948317)x1 copy number loss See cases [RCV000140416] Chr4:80043949..86948317 [GRCh38]
Chr4:80965103..87869469 [GRCh37]
Chr4:81184127..88088493 [NCBI36]
Chr4:4q21.21-21.3		 pathogenic
GRCh38/hg38 4q13.2-22.3(chr4:68686088-95294456)x3 copy number gain See cases [RCV000143458] Chr4:68686088..95294456 [GRCh38]
Chr4:69551806..96215607 [GRCh37]
Chr4:69234401..96434630 [NCBI36]
Chr4:4q13.2-22.3		 pathogenic
GRCh38/hg38 4q12-22.3(chr4:51831622-97505618)x3 copy number gain See cases [RCV000051772] Chr4:51831622..97505618 [GRCh38]
Chr4:52697788..98426769 [GRCh37]
Chr4:52392545..98645792 [NCBI36]
Chr4:4q12-22.3		 pathogenic
GRCh38/hg38 4q13.2-21.23(chr4:67869564-85517308)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053294]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053294]|See cases [RCV000053294] Chr4:67869564..85517308 [GRCh38]
Chr4:68735282..86438461 [GRCh37]
Chr4:68417877..86657485 [NCBI36]
Chr4:4q13.2-21.23		 pathogenic
GRCh38/hg38 4q13.3-22.1(chr4:74031395-90421127)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053296]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053296]|See cases [RCV000053296] Chr4:74031395..90421127 [GRCh38]
Chr4:74897112..91342278 [GRCh37]
Chr4:75115976..91561301 [NCBI36]
Chr4:4q13.3-22.1		 pathogenic
GRCh38/hg38 4q21.21-22.1(chr4:79575748-92412449)x1 copy number loss See cases [RCV000053297] Chr4:79575748..92412449 [GRCh38]
Chr4:80496902..93333600 [GRCh37]
Chr4:80715926..93552623 [NCBI36]
Chr4:4q21.21-22.1		 pathogenic
GRCh38/hg38 4q21.22-21.3(chr4:82248692-86778340)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053319]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053319]|See cases [RCV000053319] Chr4:82248692..86778340 [GRCh38]
Chr4:83169845..87699493 [GRCh37]
Chr4:83388869..87918517 [NCBI36]
Chr4:4q21.22-21.3		 pathogenic
GRCh38/hg38 4q21.21-23(chr4:79123548-99457773)x1 copy number loss Chromosome 4q21 deletion syndrome [RCV003327709] Chr4:79123548..99457773 [GRCh38]
Chr4:4q21.21-23		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:333
Count of miRNA genes:307
Interacting mature miRNAs:328
Transcripts:ENST00000318186, ENST00000451762
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-53374  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,929,662 - 85,929,895UniSTSGRCh37
Build 36486,148,686 - 86,148,919RGDNCBI36
Celera483,220,051 - 83,220,284RGD
Cytogenetic Map4q21.3UniSTS
HuRef481,671,870 - 81,672,103UniSTS
TNG Radiation Hybrid Map447359.0UniSTS
RH93412  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,929,662 - 85,929,750UniSTSGRCh37
Build 36486,148,686 - 86,148,774RGDNCBI36
Celera483,220,051 - 83,220,139RGD
Cytogenetic Map4q21.3UniSTS
HuRef481,671,870 - 81,671,958UniSTS
GeneMap99-GB4 RH Map4451.71UniSTS
RH119340  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,921,170 - 85,921,487UniSTSGRCh37
Build 36486,140,194 - 86,140,511RGDNCBI36
Celera483,211,476 - 83,211,793RGD
Cytogenetic Map4q21.3UniSTS
HuRef481,663,361 - 81,663,678UniSTS
RH123684  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,921,170 - 85,921,489UniSTSGRCh37
Build 36486,140,194 - 86,140,513RGDNCBI36
Celera483,211,476 - 83,211,795RGD
Cytogenetic Map4q21.3UniSTS
HuRef481,663,361 - 81,663,680UniSTS
TNG Radiation Hybrid Map450538.0UniSTS
D4S1204  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,916,765 - 85,916,926UniSTSGRCh37
Build 36486,135,789 - 86,135,950RGDNCBI36
Celera483,207,077 - 83,207,238RGD
Cytogenetic Map4q21.3UniSTS
HuRef481,658,957 - 81,659,118UniSTS
SHGC-50898  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,916,625 - 85,916,959UniSTSGRCh37
Build 36486,135,649 - 86,135,983RGDNCBI36
Celera483,206,937 - 83,207,271RGD
Cytogenetic Map4q21.3UniSTS
HuRef481,658,817 - 81,659,151UniSTS
TNG Radiation Hybrid Map450530.0UniSTS
UniSTS:487344  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37485,887,538 - 85,887,959UniSTSGRCh37
Build 36486,106,562 - 86,106,983RGDNCBI36
Celera483,177,852 - 83,178,273RGD
HuRef481,629,733 - 81,630,154UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2 7 7 1 1 2 1 4 100 61 11 10 3 1
Low 2054 2118 1352 235 509 110 4074 1850 3632 347 1388 1556 134 1197 2611 5 2
Below cutoff 381 851 362 386 892 351 282 342 2 11 61 44 37 7 177 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NR_015359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_152782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC108021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ333364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK124663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY250185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC033127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX104489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA127567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA988208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA988209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OA988210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000318186
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,966,935 - 85,008,729 (+)Ensembl
RefSeq Acc Id: ENST00000451762
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,966,226 - 85,011,277 (+)Ensembl
RefSeq Acc Id: ENST00000624443
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,711 - 85,008,485 (+)Ensembl
RefSeq Acc Id: ENST00000650984
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,649 - 85,008,730 (+)Ensembl
RefSeq Acc Id: ENST00000650985
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,711 - 85,007,233 (+)Ensembl
RefSeq Acc Id: ENST00000651069
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,969,774 - 84,987,173 (+)Ensembl
RefSeq Acc Id: ENST00000651209
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,966,809 - 85,008,706 (+)Ensembl
RefSeq Acc Id: ENST00000651404
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,660 - 85,008,485 (+)Ensembl
RefSeq Acc Id: ENST00000651772
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,967,520 - 84,986,975 (+)Ensembl
RefSeq Acc Id: ENST00000651773
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,630 - 85,008,707 (+)Ensembl
RefSeq Acc Id: ENST00000651845
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,534 - 85,008,734 (+)Ensembl
RefSeq Acc Id: ENST00000651964
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,969,727 - 84,987,014 (+)Ensembl
RefSeq Acc Id: ENST00000651995
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,711 - 85,008,735 (+)Ensembl
RefSeq Acc Id: ENST00000652101
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,756 - 85,008,731 (+)Ensembl
RefSeq Acc Id: ENST00000652114
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,682 - 85,008,727 (+)Ensembl
RefSeq Acc Id: ENST00000652163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,657 - 84,986,975 (+)Ensembl
RefSeq Acc Id: ENST00000652207
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,564 - 85,008,731 (+)Ensembl
RefSeq Acc Id: ENST00000652312
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,966,748 - 85,008,485 (+)Ensembl
RefSeq Acc Id: ENST00000652392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,966,982 - 85,008,706 (+)Ensembl
RefSeq Acc Id: ENST00000652452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,967,559 - 85,006,268 (+)Ensembl
RefSeq Acc Id: ENST00000652474
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,630 - 85,008,730 (+)Ensembl
RefSeq Acc Id: ENST00000652481
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,650 - 85,008,485 (+)Ensembl
RefSeq Acc Id: ENST00000652490
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,966,793 - 85,008,735 (+)Ensembl
RefSeq Acc Id: ENST00000652610
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,967,478 - 85,008,731 (+)Ensembl
RefSeq Acc Id: ENST00000652652
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,967,017 - 85,008,707 (+)Ensembl
RefSeq Acc Id: ENST00000652697
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl484,965,650 - 85,008,743 (+)Ensembl
RefSeq Acc Id: NR_015359
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,966,732 - 85,008,743 (+)NCBI
GRCh37485,887,895 - 85,929,896 (+)NCBI
Celera483,178,285 - 83,218,557 (+)RGD
HuRef481,630,166 - 81,670,376 (+)RGD
CHM1_1485,865,149 - 85,905,346 (+)NCBI
T2T-CHM13v2.0488,296,750 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152771
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,965,616 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,295,634 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152772
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,965,616 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,295,634 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152773
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,965,616 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,295,634 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152774
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,965,616 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,295,634 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152775
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,965,616 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,295,634 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152776
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,966,732 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,296,750 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152778
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,966,732 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,296,750 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152779
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,966,732 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,296,750 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152780
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,966,732 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,296,750 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152781
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,966,732 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,296,750 - 88,338,762 (+)NCBI
Sequence:
RefSeq Acc Id: NR_152782
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38484,967,484 - 85,008,743 (+)NCBI
T2T-CHM13v2.0488,297,502 - 88,338,762 (+)NCBI
Sequence:
Protein Sequences
GenBank Protein AAP76295 (Get FASTA)   NCBI Sequence Viewer  
  EAX05957 (Get FASTA)   NCBI Sequence Viewer  
  EAX05958 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences

Promoters
RGD ID:6802259
Promoter ID:HG_KWN:48650
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000359424,   OTTHUMT00000280506,   OTTHUMT00000280507
Position:
Human AssemblyChrPosition (strand)Source
Build 36486,106,281 - 86,106,882 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
COSMIC WDFY3-AS2 COSMIC
Ensembl Genes ENSG00000180769 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000318186 ENTREZGENE
  ENST00000650984 ENTREZGENE
  ENST00000651209 ENTREZGENE
  ENST00000651773 ENTREZGENE
  ENST00000652207 ENTREZGENE
  ENST00000652312 ENTREZGENE
  ENST00000652474 ENTREZGENE
  ENST00000652490 ENTREZGENE
  ENST00000652610 ENTREZGENE
  ENST00000652652 ENTREZGENE
GTEx ENSG00000180769 GTEx
HGNC ID HGNC:21603 ENTREZGENE
Human Proteome Map WDFY3-AS2 Human Proteome Map
NCBI Gene 404201 ENTREZGENE
PharmGKB PA165664370 PharmGKB
RNAcentral URS0000CCDF91 RNACentral
  URS0000CCDF93 RNACentral
  URS0000CCDFEF RNACentral
  URS0000CCDFF8 RNACentral
  URS0000CCE01A RNACentral
  URS0000CCE030 RNACentral
  URS0000CCE078 RNACentral
  URS0000CCE0C4 RNACentral
  URS0000CCE0C6 RNACentral
  URS0000CCE0D7 RNACentral
  URS0000CCE129 RNACentral
  URS0000CCE141 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-08-21 WDFY3-AS2  WDFY3 antisense RNA 2  WDFY3-AS2  WDFY3 antisense RNA 2 (non-protein coding)  Symbol and/or name change 5135510 APPROVED
2011-09-01 WDFY3-AS2  WDFY3 antisense RNA 2 (non-protein coding)  NCRNA00247  non-protein coding RNA 247  Symbol and/or name change 5135510 APPROVED
2011-07-27 NCRNA00247  non-protein coding RNA 247  C4orf12  chromosome 4 open reading frame 12  Symbol and/or name change 5135510 APPROVED