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Gene: Bsn (bassoon (presynaptic cytomatrix protein)) Rattus norvegicus
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Symbol: Bsn
Name: bassoon (presynaptic cytomatrix protein)
Description: Exhibits dynein light chain binding activity and transcription corepressor binding activity. Involved in presynaptic active zone assembly; regulation of ubiquitin protein ligase activity; and retrograde axonal transport. Localizes to several cellular components, including the axon cytoplasm; cytoplasmic vesicle; and hippocampal mossy fiber to CA3 synapse. Colocalizes with the synaptic membrane. Orthologous to human BSN (bassoon presynaptic cytomatrix protein); INTERACTS WITH 4-amino-2,6-dinitrotoluene; amphetamine; androgen antagonist.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: bassoon; neuronal double zinc finger protein; zinc finger protein 231; Znf231
Orthologs:
Homo sapiens (human) : BSN (bassoon presynaptic cytomatrix protein)  HGNC  Alliance
Mus musculus (house mouse) : Bsn (bassoon)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Bsn (bassoon presynaptic cytomatrix protein)
Pan paniscus (bonobo/pygmy chimpanzee) : BSN (bassoon presynaptic cytomatrix protein)
Canis lupus familiaris (dog) : BSN (bassoon presynaptic cytomatrix protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Bsn (bassoon presynaptic cytomatrix protein)
Sus scrofa (pig) : BSN (bassoon presynaptic cytomatrix protein)
more info ...
Allele / Splice: Bsnem1Ionsz  
Genetic Models: SD-Bsnem1Ionsz
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08116,873,721 - 116,965,396 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,873,721 - 116,965,396 (-)Ensembl
Rnor_5.08116,227,802 - 116,319,071 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,364,208 - 113,455,766 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18113,387,192 - 113,475,221 (-)NCBI
Celera8108,089,061 - 108,180,178 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Bsn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2223
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.