Ahnak (AHNAK nucleoprotein) - Rat Genome Database

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Gene: Ahnak (AHNAK nucleoprotein) Heterocephalus glaber
Analyze
Symbol: Ahnak
Name: AHNAK nucleoprotein
RGD ID: 18936803
Description: ENCODES a protein that exhibits identical protein binding (ortholog); S100 protein binding (ortholog); structural molecule activity conferring elasticity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Chloracne (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell contact zone (ortholog); costamere (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuroblast differentiation-associated protein AHNAK
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249261,071,969 - 1,101,587 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ahnak
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249261,071,969 - 1,101,587 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
AHNAK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381162,433,544 - 62,546,806 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1162,433,542 - 62,556,235 (-)EnsemblGRCh38hg38GRCh38
GRCh371162,201,016 - 62,314,278 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361161,957,592 - 62,070,908 (-)NCBINCBI36Build 36hg18NCBI36
Build 341162,040,583 - 62,050,282NCBI
Celera1159,530,422 - 59,643,724 (-)NCBICelera
Cytogenetic Map11q12.3NCBI
HuRef1158,529,120 - 58,643,196 (-)NCBIHuRef
CHM1_11162,084,072 - 62,197,372 (-)NCBICHM1_1
T2T-CHM13v2.01162,422,994 - 62,537,374 (-)NCBIT2T-CHM13v2.0
Ahnak
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39198,966,640 - 9,054,299 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl198,966,648 - 9,054,278 (+)EnsemblGRCm39 Ensembl
GRCm38198,989,284 - 9,076,935 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl198,989,284 - 9,076,914 (+)EnsemblGRCm38mm10GRCm38
MGSCv37199,063,774 - 9,151,409 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36199,056,329 - 9,143,964 (+)NCBIMGSCv36mm8
Celera198,749,907 - 8,837,406 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map196.04NCBI
Ahnak
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81215,311,289 - 215,400,010 (+)NCBIGRCr8
mRatBN7.21205,882,225 - 205,970,934 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1205,882,273 - 205,970,926 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1214,290,841 - 214,357,380 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01221,325,592 - 221,393,197 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01214,018,448 - 214,065,857 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01225,184,883 - 225,429,638 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1225,184,939 - 225,215,015 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01232,122,559 - 232,152,286 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41211,662,523 - 211,692,558 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11211,841,124 - 211,841,424 (+)NCBI
Celera1203,395,054 - 203,423,580 (+)NCBICelera
Cytogenetic Map1q43NCBI
Ahnak
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955599629,271 - 656,564 (+)NCBIChiLan1.0ChiLan1.0
AHNAK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2963,743,019 - 63,774,483 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11164,785,726 - 64,816,687 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01157,791,927 - 57,904,277 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11161,149,485 - 61,259,175 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1161,149,485 - 61,249,137 (-)Ensemblpanpan1.1panPan2
AHNAK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11854,085,186 - 54,116,011 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1854,100,942 - 54,113,424 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1852,690,025 - 52,721,586 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01855,136,824 - 55,169,332 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1855,148,346 - 55,232,170 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11854,234,768 - 54,266,243 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01853,807,218 - 53,839,721 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01854,603,726 - 54,636,260 (+)NCBIUU_Cfam_GSD_1.0
Ahnak
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494710,588,763 - 10,678,979 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936581702,579 - 792,762 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AHNAK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.129,186,984 - 9,216,450 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.228,528,073 - 8,544,759 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AHNAK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1111,352,848 - 11,384,944 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038108,691,523 - 108,724,002 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021251803   ⟹   XP_021107462
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,096,125 (-)NCBI
RefSeq Acc Id: XM_021251804   ⟹   XP_021107463
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,095,542 (-)NCBI
RefSeq Acc Id: XM_021251805   ⟹   XP_021107464
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,095,176 (-)NCBI
RefSeq Acc Id: XM_021251806   ⟹   XP_021107465
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,101,587 (-)NCBI
RefSeq Acc Id: XM_021251807   ⟹   XP_021107466
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,093,649 (-)NCBI
RefSeq Acc Id: XM_021251808   ⟹   XP_021107467
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,095,595 (-)NCBI
RefSeq Acc Id: XM_021251809   ⟹   XP_021107468
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,095,204 (-)NCBI
RefSeq Acc Id: XM_021251810   ⟹   XP_021107469
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,096,125 (-)NCBI
RefSeq Acc Id: XM_021251811   ⟹   XP_021107470
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249261,071,969 - 1,096,125 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_021107465   ⟸   XM_021251806
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021107470   ⟸   XM_021251811
- Peptide Label: isoform X3
RefSeq Acc Id: XP_021107469   ⟸   XM_021251810
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021107462   ⟸   XM_021251803
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021107467   ⟸   XM_021251808
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021107463   ⟸   XM_021251804
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021107468   ⟸   XM_021251809
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021107464   ⟸   XM_021251805
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021107466   ⟸   XM_021251807
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
NCBI Gene Ahnak ENTREZGENE