Slc26a8 (solute carrier family 26 member 8) - Rat Genome Database

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Gene: Slc26a8 (solute carrier family 26 member 8) Heterocephalus glaber
Analyze
Symbol: Slc26a8
Name: solute carrier family 26 member 8
RGD ID: 18936189
Description: ENCODES a protein that exhibits chloride channel activity (ortholog); oxalate transmembrane transporter activity (ortholog); sulfate transmembrane transporter activity (ortholog); INVOLVED IN chloride transport (ortholog); oxalate transport (ortholog); sulfate transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog); schizophrenia (ortholog); FOUND IN plasma membrane (ortholog); sperm annulus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: testis anion transporter 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475421,608,000 - 21,667,083 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475421,607,197 - 21,667,484 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc26a8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475421,608,000 - 21,667,083 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475421,607,197 - 21,667,484 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
SLC26A8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38635,943,516 - 36,024,641 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl635,943,516 - 36,024,868 (-)EnsemblGRCh38hg38GRCh38
GRCh37635,911,293 - 35,992,418 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36636,019,271 - 36,100,355 (-)NCBINCBI36Build 36hg18NCBI36
Build 34636,019,275 - 36,100,248NCBI
Celera637,465,857 - 37,546,973 (-)NCBICelera
Cytogenetic Map6p21.31NCBI
HuRef635,631,132 - 35,712,425 (-)NCBIHuRef
CHM1_1635,913,031 - 35,994,194 (-)NCBICHM1_1
T2T-CHM13v2.0635,763,833 - 35,844,951 (-)NCBIT2T-CHM13v2.0
Slc26a8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391728,856,757 - 28,910,242 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1728,856,757 - 28,909,207 (-)EnsemblGRCm39 Ensembl
GRCm381728,637,779 - 28,691,273 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1728,637,783 - 28,690,233 (-)EnsemblGRCm38mm10GRCm38
MGSCv371728,773,937 - 28,826,932 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361728,377,246 - 28,417,576 (-)NCBIMGSCv36mm8
Celera1729,192,614 - 29,244,985 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1714.82NCBI
Slc26a8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8206,687,207 - 6,751,184 (-)NCBIGRCr8
mRatBN7.2206,686,206 - 6,749,478 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl206,697,723 - 6,749,478 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx207,410,384 - 7,462,124 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0206,772,225 - 6,823,971 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0207,253,123 - 7,305,327 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0205,870,714 - 5,933,151 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,881,462 - 5,931,648 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,916,755 - 7,967,148 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4206,898,665 - 6,937,594 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1206,886,712 - 6,939,187 (-)NCBI
Celera208,242,917 - 8,305,701 (-)NCBICelera
Cytogenetic Map20p12NCBI
Slc26a8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554373,741,284 - 3,811,819 (-)NCBIChiLan1.0ChiLan1.0
SLC26A8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2550,408,385 - 50,490,393 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1646,277,982 - 46,359,951 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0635,502,875 - 35,584,146 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1636,705,860 - 36,785,610 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl636,705,860 - 36,785,610 (-)Ensemblpanpan1.1panPan2
SLC26A8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1125,059,267 - 5,145,387 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl125,060,306 - 5,135,677 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha125,080,039 - 5,165,345 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0125,408,442 - 5,493,141 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl125,408,211 - 5,483,212 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1125,062,493 - 5,147,808 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0125,142,535 - 5,227,099 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0125,243,004 - 5,327,100 (-)NCBIUU_Cfam_GSD_1.0
Slc26a8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494640,580,630 - 40,648,654 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647623,315,902 - 23,379,260 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647623,311,740 - 23,380,119 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC26A8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl731,722,103 - 31,791,802 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1731,722,409 - 31,791,620 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2736,660,015 - 36,725,721 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC26A8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11736,097,458 - 36,175,638 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1736,103,139 - 36,175,459 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604435,892,285 - 35,967,132 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000022496   ⟹   ENSHGLP00000022285
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475421,608,000 - 21,667,083 (+)Ensembl
RefSeq Acc Id: XM_021259934   ⟹   XP_021115593
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475421,607,197 - 21,667,484 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021115593 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000022285
Reference Protein Sequences
RefSeq Acc Id: XP_021115593   ⟸   XM_021259934
RefSeq Acc Id: ENSHGLP00000022285   ⟸   ENSHGLT00000022496


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000015890 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000022496 ENTREZGENE
NCBI Gene Slc26a8 ENTREZGENE