Acadsb (acyl-CoA dehydrogenase short/branched chain) - Rat Genome Database
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Gene: Acadsb (acyl-CoA dehydrogenase short/branched chain) Heterocephalus glaber
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Symbol: Acadsb
Name: acyl-CoA dehydrogenase short/branched chain
RGD ID: 18935992
Description: ENCODES a protein that exhibits 2-methylacyl-CoA dehydrogenase activity (ortholog); acyl-CoA dehydrogenase activity (ortholog); electron transfer activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid metabolic process (ortholog); isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 2-Methylbutyryl-CoA Dehydrogenase Deficiency (ortholog); autistic disorder (ortholog); epilepsy (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
Orthologs:
Homo sapiens (human) : ACADSB (acyl-CoA dehydrogenase short/branched chain)  HGNC  Alliance
Mus musculus (house mouse) : Acadsb (acyl-Coenzyme A dehydrogenase, short/branched chain)  MGI  Alliance
Rattus norvegicus (Norway rat) : Acadsb (acyl-CoA dehydrogenase, short/branched chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Acadsb (acyl-CoA dehydrogenase short/branched chain)
Pan paniscus (bonobo/pygmy chimpanzee) : ACADSB (acyl-CoA dehydrogenase short/branched chain)
Canis lupus familiaris (dog) : ACADSB (acyl-CoA dehydrogenase short/branched chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Acadsb (acyl-CoA dehydrogenase short/branched chain)
Sus scrofa (pig) : ACADSB (acyl-CoA dehydrogenase short/branched chain)
Chlorocebus sabaeus (African green monkey) : ACADSB (acyl-CoA dehydrogenase short/branched chain)
more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473723,949,008 - 23,999,544 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
Acadsb
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473723,949,008 - 23,999,544 (-)NCBI
ACADSB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl10123,008,979 - 123,058,311 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl10123,008,979 - 123,058,290 (+)EnsemblGRCh38hg38GRCh38
GRCh3810123,009,006 - 123,058,290 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3710124,768,429 - 124,817,806 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610124,758,419 - 124,807,796 (+)NCBINCBI36hg18NCBI36
Build 3410124,758,523 - 124,807,795NCBI
Celera10118,474,901 - 118,524,347 (+)NCBI
Cytogenetic Map10q26.13NCBI
HuRef10118,386,177 - 118,435,556 (+)NCBIHuRef
CHM1_110125,050,159 - 125,099,529 (+)NCBICHM1_1
Acadsb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397131,012,330 - 131,047,940 (+)NCBI
GRCm387131,410,601 - 131,446,211 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7131,410,601 - 131,448,944 (+)EnsemblGRCm38mm10GRCm38
MGSCv377138,554,115 - 138,589,725 (+)NCBIGRCm37mm9NCBIm37
MGSCv367131,201,849 - 131,237,354 (+)NCBImm8
Celera7131,221,745 - 131,258,475 (+)NCBICelera
Cytogenetic Map7F3NCBI
Acadsb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01201,981,362 - 202,022,771 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1201,981,357 - 202,021,008 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01209,013,684 - 209,048,775 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41190,987,657 - 191,026,275 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11191,165,470 - 191,176,156 (+)NCBI
Celera1183,943,792 - 183,982,502 (+)NCBICelera
Cytogenetic Map1q41NCBI
Acadsb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554771,177,680 - 1,213,347 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554771,177,704 - 1,213,347 (+)NCBIChiLan1.0ChiLan1.0
ACADSB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.110123,839,570 - 123,886,759 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10123,839,570 - 123,886,759 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v010119,565,913 - 119,612,092 (+)NCBIMhudiblu_PPA_v0panPan3
ACADSB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2832,563,671 - 32,601,063 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12832,563,697 - 32,604,006 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Acadsb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493648611,668,099 - 11,707,946 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACADSB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14132,563,309 - 132,626,841 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114132,563,002 - 132,607,574 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214144,149,537 - 144,190,530 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ACADSB
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl9115,684,279 - 115,724,412 (+)Ensembl
ChlSab1.19115,684,301 - 115,725,801 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004838768   ⟹   XP_004838825
RefSeq Status:
Type: CODING
Position:
Molerat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473723,949,008 - 23,999,543 (-)NCBI
RefSeq Acc Id: XM_004838769   ⟹   XP_004838826
RefSeq Status:
Type: CODING
Position:
Molerat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473723,954,306 - 23,999,544 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004838825 (Get FASTA)   NCBI Sequence Viewer  
  XP_004838826 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein JAO03168 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_004838825   ⟸   XM_004838768
- Peptide Label: isoform X1
- UniProtKB: A0A0P6JFP7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004838826   ⟸   XM_004838769
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000016362 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSHGLP00000022937 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000023151 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.10.540.10 UniProtKB/TrEMBL
InterPro Acyl-CoA_DH_CS UniProtKB/TrEMBL
  Acyl-CoA_Oxase/DH_cen-dom UniProtKB/TrEMBL
  AcylCo_DH-like_C UniProtKB/TrEMBL
  AcylCo_DH/oxidase_C UniProtKB/TrEMBL
  AcylCoA_DH/ox_N UniProtKB/TrEMBL
  AcylCoA_DH/ox_N_sf UniProtKB/TrEMBL
  AcylCoA_DH/oxidase_NM_dom UniProtKB/TrEMBL
KEGG Report hgl:101698912 UniProtKB/TrEMBL
NCBI Gene Acadsb ENTREZGENE
Pfam Acyl-CoA_dh_1 UniProtKB/TrEMBL
  Acyl-CoA_dh_M UniProtKB/TrEMBL
  Acyl-CoA_dh_N UniProtKB/TrEMBL
PROSITE ACYL_COA_DH_1 UniProtKB/TrEMBL
  ACYL_COA_DH_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF47203 UniProtKB/TrEMBL
  SSF56645 UniProtKB/TrEMBL
UniProt A0A0P6JFP7 ENTREZGENE, UniProtKB/TrEMBL