CUNHXorf66 (chromosome unknown CXorf66 homolog) - Rat Genome Database

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Gene: CUNHXorf66 (chromosome unknown CXorf66 homolog) Heterocephalus glaber
Analyze
Symbol: CUNHXorf66
Name: chromosome unknown CXorf66 homolog
RGD ID: 18934216
Description: ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); hemophilia B (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein CXorf66 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248086,752,961 - 6,756,556 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
CUNHXorf66
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248086,752,961 - 6,756,556 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CXorf66
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X139,955,728 - 139,965,521 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX139,955,728 - 139,965,521 (-)EnsemblGRCh38hg38GRCh38
GRCh37X139,037,887 - 139,047,680 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X138,865,550 - 138,875,345 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX139,405,526 - 139,415,319 (-)NCBICelera
Cytogenetic MapXq27.1NCBI
HuRefX128,305,293 - 128,306,307 (-)NCBIHuRef
CHM1_1X138,948,920 - 138,958,713 (-)NCBICHM1_1
T2T-CHM13v2.0X138,267,667 - 138,277,460 (-)NCBIT2T-CHM13v2.0
Gm7073
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X59,481,236 - 59,502,437 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX59,481,241 - 59,502,437 (-)EnsemblGRCm39 Ensembl
GRCm38X60,436,047 - 60,456,195 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX60,436,052 - 60,539,249 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X57,689,227 - 57,709,370 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X57,689,227 - 57,709,370 (-)NCBIMGSCv36mm8
CeleraX46,876,077 - 46,896,791 (-)NCBICelera
Cytogenetic MapXA6NCBI
cM MapX33.5NCBI
Cxhxorf66
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X143,815,665 - 143,855,883 (-)NCBIGRCr8
mRatBN7.2X138,779,374 - 138,819,595 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX138,779,382 - 138,785,707 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X143,554,334 - 143,596,247 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX143,554,441 - 143,558,521 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X143,582,426 - 143,623,550 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X145,966,542 - 145,970,640 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX134,850,165 - 134,890,849 (-)NCBICelera
Cytogenetic MapXq36NCBI
CUNHXorf66
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554895,318,531 - 5,327,883 (+)NCBIChiLan1.0ChiLan1.0
CXHXorf66
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X139,404,496 - 139,415,405 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X139,408,098 - 139,419,007 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X129,106,870 - 129,116,750 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X139,356,755 - 139,366,559 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX139,356,748 - 139,366,612 (-)Ensemblpanpan1.1panPan2
CXHXorf66
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X109,898,857 - 109,902,202 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX109,899,034 - 109,902,143 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX95,726,035 - 95,729,379 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X111,887,012 - 111,890,356 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X109,019,147 - 109,022,491 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X111,203,804 - 111,207,149 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X110,883,266 - 110,886,610 (-)NCBIUU_Cfam_GSD_1.0
CXHXorf66
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X107,946,213 - 107,950,539 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365137,664,110 - 7,668,227 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CXHXorf66
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1X114,596,809 - 114,602,521 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X130,868,310 - 130,872,289 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CUNHXorf66
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X115,037,556 - 115,047,635 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX115,037,727 - 115,047,390 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606552,772,529 - 52,782,385 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021242542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01074149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021242542   ⟹   XP_021098201
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248086,752,961 - 6,756,556 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021098201 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000007232
Reference Protein Sequences
RefSeq Acc Id: XP_021098201   ⟸   XM_021242542


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005266 ENTREZGENE
Ensembl Transcript ENSHGLT00000007317 ENTREZGENE
NCBI Gene CUNHXorf66 ENTREZGENE