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Gene: Kif20a (kinesin family member 20A) Heterocephalus glaber

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Symbol:

Kif20a

Name:

kinesin family member 20A

RGD ID:

18933638

Description:

ENCODES a protein that exhibits ATP binding (inferred); cytoskeletal motor activity (inferred); microtubule binding (inferred); INVOLVED IN microtubule bundle formation (inferred); microtubule-based movement (inferred); midbody abscission (inferred); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); COVID-19 (ortholog); familial adenomatous polyposis 1 (ortholog); FOUND IN cytoplasm (inferred); cytoskeleton (inferred); intercellular bridge (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

kinesin-like protein KIF20A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	30,995,526 - 31,011,396 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	30,994,664 - 31,003,858 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant intellectual developmental disorder 31 (ISO)

COVID-19 (ISO)

familial adenomatous polyposis 1 (ISO)

Familial Restrictive Cardiomyopathy 6 (ISO)

hepatocellular carcinoma (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

STING-associated vasculopathy with onset in infancy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

microtubule bundle formation (IEA)

microtubule-based movement (IEA)

midbody abscission (IEA)

mitotic cytokinesis (IEA)

mitotic spindle assembly (IEA)

regulation of cytokinesis (IEA)

spindle elongation (IEA)

Cellular Component

cytoplasm (IEA)

cytoskeleton (IEA)

intercellular bridge (IEA)

microtubule (IEA)

midbody (IEA)

mitotic spindle (IEA)

nucleoplasm (IEA)

nucleus (IEA)

spindle (IEA)

spindle microtubule (IEA)

Molecular Function

ATP binding (IEA)

cytoskeletal motor activity (IEA)

microtubule binding (IEA)

microtubule motor activity (IEA)

plus-end-directed microtubule motor activity (IEA)

protein binding (ISO)

protein kinase binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Kif20a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	30,995,526 - 31,011,396 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	30,994,664 - 31,003,858 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

KIF20A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	138,179,112 - 138,187,723 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	138,178,719 - 138,187,723 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	137,514,801 - 137,523,412 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	137,542,784 - 137,551,261 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	137,543,247 - 137,551,259	NCBI
Celera	5	133,635,706 - 133,644,693 (+)	NCBI		Celera
Cytogenetic Map	5	q31.2	NCBI
HuRef	5	132,705,415 - 132,714,402 (+)	NCBI		HuRef
CHM1_1	5	136,947,040 - 136,956,027 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	138,705,404 - 138,714,015 (+)	NCBI		T2T-CHM13v2.0

Kif20a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	34,757,677 - 34,766,330 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	34,757,666 - 34,766,330 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	34,624,624 - 34,633,277 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	34,624,613 - 34,633,277 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	34,784,278 - 34,792,931 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	34,749,796 - 34,758,078 (+)	NCBI		MGSCv36	mm8
Celera	18	35,077,037 - 35,085,702 (+)	NCBI		Celera
Cytogenetic Map	18	B1	NCBI
cM Map	18	18.69	NCBI

Kif20a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	26,504,422 - 26,512,908 (+)	NCBI		GRCr8
mRatBN7.2	18	26,230,294 - 26,238,780 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	26,230,230 - 26,238,780 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	26,357,675 - 26,366,161 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	27,121,481 - 27,129,979 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	26,456,388 - 26,464,886 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	27,424,328 - 27,432,814 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	27,424,328 - 27,432,814 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	27,137,685 - 27,146,171 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	27,100,044 - 27,108,530 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	27,126,319 - 27,135,178 (+)	NCBI
Celera	18	25,967,936 - 25,976,422 (+)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

Kif20a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	2,222,398 - 2,232,775 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	2,222,398 - 2,232,775 (-)	NCBI	ChiLan1.0	ChiLan1.0

KIF20A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	133,452,429 - 133,461,478 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	131,591,982 - 131,601,019 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	133,557,456 - 133,566,089 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	139,690,512 - 139,699,446 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	139,690,517 - 139,699,446 (+)	Ensembl	panpan1.1		panPan2

KIF20A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	25,826,140 - 25,834,220 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	25,825,747 - 25,833,985 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	24,592,059 - 24,604,038 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	26,678,590 - 26,690,572 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	26,679,487 - 26,690,569 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	25,385,711 - 25,397,687 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	25,208,292 - 25,220,262 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	25,872,755 - 25,884,735 (+)	NCBI		UU_Cfam_GSD_1.0

Kif20a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	154,240,161 - 154,249,493 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	7,361,928 - 7,374,789 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936531	7,361,928 - 7,371,397 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIF20A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	140,202,015 - 140,211,155 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	140,202,316 - 140,213,144 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	145,901,017 - 145,910,033 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIF20A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	40,848,762 - 40,857,685 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	40,849,108 - 40,857,434 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	37,032,588 - 37,041,180 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_004841806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01022399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GEBF01000307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSHGLT00000019237 ⟹ ENSHGLP00000019047

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624743	30,995,526 - 31,011,396 (+)	Ensembl

RefSeq Acc Id:

XM_004841806 ⟹ XP_004841863

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624743	30,994,664 - 31,003,858 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_004841863	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSHGLP00000058787
	ENSHGLP00100044176
GenBank Protein	JAO03326	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_004841863 ⟸ XM_004841806
- UniProtKB:	A0A0N8EUY2 (UniProtKB/TrEMBL), G5BA39 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSHGLP00000019047 ⟸ ENSHGLT00000019237

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSHGLG00000013647	Ensembl, UniProtKB/TrEMBL
	ENSHGLG00100016649	UniProtKB/TrEMBL
Ensembl Transcript	ENSHGLT00000059249	UniProtKB/TrEMBL
	ENSHGLT00100062125	UniProtKB/TrEMBL
Gene3D-CATH	3.40.850.10	UniProtKB/TrEMBL
InterPro	Kinesin-like_fam	UniProtKB/TrEMBL
	Kinesin_motor_CS	UniProtKB/TrEMBL
	Kinesin_motor_dom	UniProtKB/TrEMBL
	Kinesin_motor_dom_sf	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
KEGG Report	hgl:101711118	UniProtKB/TrEMBL
NCBI Gene	Kif20a	ENTREZGENE
PANTHER	KINESIN-LIKE PROTEIN KIF20A	UniProtKB/TrEMBL
	KINESIN-RELATED	UniProtKB/TrEMBL
Pfam	Kinesin	UniProtKB/TrEMBL
PRINTS	KINESINHEAVY	UniProtKB/TrEMBL
PROSITE	KINESIN_MOTOR_1	UniProtKB/TrEMBL
	KINESIN_MOTOR_2	UniProtKB/TrEMBL
SMART	KISc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A0N8EUY2	ENTREZGENE, UniProtKB/TrEMBL
	G5BA39	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM