Lyg2 (lysozyme g2) - Rat Genome Database

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Gene: Lyg2 (lysozyme g2) Heterocephalus glaber
Analyze
Symbol: Lyg2
Name: lysozyme g2
RGD ID: 18933170
Description: ENCODES a protein that exhibits lysozyme activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN extracellular region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: lysozyme g-like protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247494,203,048 - 4,211,813 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247494,202,753 - 4,211,813 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Lyg2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247494,203,048 - 4,211,813 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247494,202,753 - 4,211,813 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
LYG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38299,242,246 - 99,261,522 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl299,242,246 - 99,255,666 (-)EnsemblGRCh38hg38GRCh38
GRCh37299,858,709 - 99,872,129 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36299,225,141 - 99,238,002 (-)NCBINCBI36Build 36hg18NCBI36
Celera294,063,301 - 94,076,202 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef293,624,359 - 93,636,992 (-)NCBIHuRef
CHM1_1299,863,602 - 99,876,397 (-)NCBICHM1_1
T2T-CHM13v2.0299,701,128 - 99,720,143 (-)NCBIT2T-CHM13v2.0
Lyg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39137,945,004 - 37,955,574 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl137,945,004 - 37,955,574 (-)EnsemblGRCm39 Ensembl
GRCm38137,905,923 - 37,916,493 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl137,905,923 - 37,916,493 (-)EnsemblGRCm38mm10GRCm38
MGSCv37137,962,768 - 37,973,338 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36137,850,469 - 37,861,039 (-)NCBIMGSCv36mm8
Celera137,686,976 - 37,697,668 (-)NCBICelera
Cytogenetic Map1BNCBI
cM Map116.2NCBI
Lyg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8947,635,914 - 47,646,618 (-)NCBIGRCr8
mRatBN7.2940,141,144 - 40,150,821 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl940,141,381 - 40,150,821 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0944,497,508 - 44,509,921 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl944,499,800 - 44,509,201 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0944,272,394 - 44,287,408 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera937,893,319 - 37,905,114 (-)NCBICelera
Cytogenetic Map9q21NCBI
Lyg2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554705,533,188 - 5,540,957 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554705,533,188 - 5,540,957 (-)NCBIChiLan1.0ChiLan1.0
LYG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21229,153,129 - 29,187,891 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A29,155,889 - 29,194,330 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A100,042,412 - 100,056,633 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A100,172,015 - 100,186,309 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A100,172,021 - 100,186,309 (-)Ensemblpanpan1.1panPan2
LYG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11043,458,359 - 43,470,792 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1043,458,176 - 43,468,290 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1043,382,989 - 43,394,586 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01044,330,878 - 44,342,283 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1044,330,878 - 44,339,744 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11044,041,728 - 44,053,327 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01044,324,894 - 44,336,299 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01044,508,926 - 44,520,331 (+)NCBIUU_Cfam_GSD_1.0
Lyg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629284,971,683 - 84,980,968 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366611,589,105 - 1,597,666 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366611,589,105 - 1,597,713 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100523177
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl355,018,193 - 55,030,212 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1355,017,788 - 55,029,381 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2357,652,937 - 57,665,207 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LYG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,946,878 - 2,968,568 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041170,547,761 - 170,559,239 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000011523   ⟹   ENSHGLP00000011396
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247494,203,048 - 4,211,813 (-)Ensembl
RefSeq Acc Id: XM_004844426   ⟹   XP_004844483
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247494,202,753 - 4,211,813 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004844483 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000011396
Reference Protein Sequences
RefSeq Acc Id: XP_004844483   ⟸   XM_004844426
RefSeq Acc Id: ENSHGLP00000011396   ⟸   ENSHGLT00000011523


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008170 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000011523 ENTREZGENE
NCBI Gene Lyg2 ENTREZGENE