Mlf1 (myeloid leukemia factor 1) - Rat Genome Database

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Gene: Mlf1 (myeloid leukemia factor 1) Heterocephalus glaber
Analyze
Symbol: Mlf1
Name: myeloid leukemia factor 1
RGD ID: 18933145
Description: ENCODES a protein that exhibits DNA binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); myeloid progenitor cell differentiation (ortholog); regulation of cell cycle G1/S phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); Stomach Neoplasms (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); cilium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473036,299,221 - 36,342,799 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473036,299,243 - 36,341,336 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Mlf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473036,299,221 - 36,342,799 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473036,299,243 - 36,341,336 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MLF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383158,571,194 - 158,606,456 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3158,571,163 - 158,607,252 (+)EnsemblGRCh38hg38GRCh38
GRCh373158,288,983 - 158,324,245 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363159,771,678 - 159,805,877 (+)NCBINCBI36Build 36hg18NCBI36
Build 343159,771,685 - 159,805,883NCBI
Celera3156,712,820 - 156,748,018 (+)NCBICelera
Cytogenetic Map3q25.32NCBI
HuRef3155,686,302 - 155,721,299 (+)NCBIHuRef
CHM1_13158,251,852 - 158,287,157 (+)NCBICHM1_1
T2T-CHM13v2.03161,346,308 - 161,381,560 (+)NCBIT2T-CHM13v2.0
Mlf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39367,281,430 - 67,307,333 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl367,281,430 - 67,307,336 (+)EnsemblGRCm39 Ensembl
GRCm38367,374,097 - 67,400,000 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl367,374,097 - 67,400,003 (+)EnsemblGRCm38mm10GRCm38
MGSCv37367,178,019 - 67,203,922 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36367,462,026 - 67,487,929 (+)NCBIMGSCv36mm8
Celera367,508,077 - 67,533,900 (+)NCBICelera
Cytogenetic Map3E1NCBI
cM Map330.91NCBI
Mlf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82153,958,060 - 153,991,705 (+)NCBIGRCr8
mRatBN7.22151,648,492 - 151,681,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2151,648,511 - 151,681,652 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2158,765,263 - 158,798,245 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02156,815,759 - 156,848,741 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02151,448,510 - 151,481,492 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02164,549,423 - 164,582,645 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2164,549,455 - 164,582,643 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02183,898,731 - 183,931,974 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42157,230,783 - 157,263,847 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12157,180,790 - 157,213,807 (+)NCBI
Celera2146,019,001 - 146,051,756 (+)NCBICelera
Cytogenetic Map2q32NCBI
Mlf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554489,345,086 - 9,383,366 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554489,345,303 - 9,383,366 (+)NCBIChiLan1.0ChiLan1.0
MLF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22156,519,545 - 156,554,800 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13156,524,277 - 156,559,532 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03155,603,168 - 155,638,424 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13163,654,983 - 163,689,688 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3163,654,983 - 163,689,688 (+)Ensemblpanpan1.1panPan2
MLF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12351,918,504 - 51,935,164 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2351,901,983 - 51,933,796 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2351,709,739 - 51,744,930 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02352,559,375 - 52,576,044 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2352,542,156 - 52,576,137 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12352,120,767 - 52,156,040 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02352,174,111 - 52,209,019 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02352,459,410 - 52,494,892 (+)NCBIUU_Cfam_GSD_1.0
Mlf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560284,492,577 - 84,525,653 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365195,208,235 - 5,241,894 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365195,208,288 - 5,241,375 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GFM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1398,357,815 - 98,408,589 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11398,357,804 - 98,405,801 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213106,650,675 - 106,696,924 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MLF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11532,225,710 - 32,258,016 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1532,221,125 - 32,258,008 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660414,788,001 - 4,821,176 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000023813   ⟹   ENSHGLP00000023595
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473036,299,221 - 36,342,799 (+)Ensembl
RefSeq Acc Id: ENSHGLT00000023814   ⟹   ENSHGLP00000023596
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473036,299,221 - 36,342,799 (+)Ensembl
RefSeq Acc Id: XM_004834514   ⟹   XP_004834571
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473036,299,243 - 36,341,336 (+)NCBI
RefSeq Acc Id: XM_004834515   ⟹   XP_004834572
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473036,299,243 - 36,341,140 (+)NCBI
RefSeq Acc Id: XM_021253593   ⟹   XP_021109252
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473036,299,243 - 36,341,336 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004834571 (Get FASTA)   NCBI Sequence Viewer  
  XP_004834572 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109252 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000023595
  ENSHGLP00000023596
GenBank Protein JAO03051 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004834571   ⟸   XM_004834514
- Peptide Label: isoform X1
- UniProtKB: G5BVR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021109252   ⟸   XM_021253593
- Peptide Label: isoform X3
- UniProtKB: G5BVR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004834572   ⟸   XM_004834515
- Peptide Label: isoform X2
- UniProtKB: A0A0P6JF02 (UniProtKB/TrEMBL),   G5BVR2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000023596   ⟸   ENSHGLT00000023814
RefSeq Acc Id: ENSHGLP00000023595   ⟸   ENSHGLT00000023813


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000016829 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000023813 ENTREZGENE
  ENSHGLT00000023814 ENTREZGENE
InterPro Myeloid_leukemia_factor UniProtKB/TrEMBL
NCBI Gene Mlf1 ENTREZGENE
PANTHER MYELOID LEUKEMIA FACTOR 1 UniProtKB/TrEMBL
  PTHR13105 UniProtKB/TrEMBL
Pfam Mlf1IP UniProtKB/TrEMBL
UniProt A0A0P6JF02 ENTREZGENE, UniProtKB/TrEMBL
  G5BVR2 ENTREZGENE, UniProtKB/TrEMBL