Mn1 (MN1 proto-oncogene, transcriptional regulator) - Rat Genome Database

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Gene: Mn1 (MN1 proto-oncogene, transcriptional regulator) Heterocephalus glaber
Analyze
Symbol: Mn1
Name: MN1 proto-oncogene, transcriptional regulator
RGD ID: 18932700
Description: INVOLVED IN intramembranous ossification (ortholog); negative regulation of osteoblast proliferation (ortholog); positive regulation of vitamin D receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); CEBALID Syndrome (ortholog); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: transcriptional activator MN1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247474,093,279 - 4,134,876 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247474,090,664 - 4,135,822 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Mn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247474,093,279 - 4,134,876 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247474,090,664 - 4,135,822 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382227,748,277 - 27,801,756 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2227,748,277 - 27,801,756 (-)EnsemblGRCh38hg38GRCh38
GRCh372228,144,265 - 28,197,744 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362226,474,265 - 26,527,486 (-)NCBINCBI36Build 36hg18NCBI36
Build 342226,468,819 - 26,522,040NCBI
Celera2211,944,239 - 11,997,449 (-)NCBICelera
Cytogenetic Map22q12.1ENTREZGENE
HuRef2211,108,458 - 11,161,677 (-)NCBIHuRef
CHM1_12228,103,532 - 28,156,750 (-)NCBICHM1_1
T2T-CHM13v2.02228,209,592 - 28,263,071 (-)NCBIT2T-CHM13v2.0
Mn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395111,565,145 - 111,604,890 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5111,565,228 - 111,604,899 (+)EnsemblGRCm39 Ensembl
GRCm385111,417,300 - 111,457,030 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5111,417,362 - 111,457,033 (+)EnsemblGRCm38mm10GRCm38
MGSCv375111,847,186 - 111,886,045 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365111,657,665 - 111,697,328 (+)NCBIMGSCv36mm8
Celera5108,545,721 - 108,584,945 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map553.86NCBI
Mn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81250,841,632 - 50,880,795 (-)NCBIGRCr8
mRatBN7.21245,181,794 - 45,220,959 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1245,183,085 - 45,221,651 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1246,357,662 - 46,393,868 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01246,963,905 - 47,000,113 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01246,024,420 - 46,060,627 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01251,214,192 - 51,250,230 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1251,214,192 - 51,250,230 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01252,955,948 - 52,991,986 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41245,318,155 - 45,355,115 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1246,751,609 - 46,787,208 (-)NCBICelera
Cytogenetic Map12q16NCBI
Mn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554552,127,377 - 2,171,850 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554552,130,104 - 2,171,868 (-)NCBIChiLan1.0ChiLan1.0
MN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22337,743,652 - 37,798,711 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12240,442,580 - 40,494,924 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0228,799,832 - 8,854,695 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12226,519,251 - 26,571,373 (-)NCBIpanpan1.1PanPan1.1panPan2
MN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12621,216,912 - 21,261,518 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2621,216,837 - 21,261,031 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2621,087,978 - 21,132,430 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02621,583,778 - 21,628,255 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2621,581,242 - 21,627,694 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12621,301,607 - 21,346,030 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02621,557,327 - 21,601,736 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02621,626,045 - 21,670,478 (-)NCBIUU_Cfam_GSD_1.0
Mn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118113,804,928 - 113,846,405 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366572,024,350 - 2,065,263 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366572,024,302 - 2,066,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1445,096,485 - 45,140,570 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11445,093,660 - 45,142,476 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21447,943,781 - 47,990,706 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11910,652,940 - 10,706,989 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1910,652,939 - 10,706,762 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045115,411,325 - 115,467,616 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004843359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01026564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000008106   ⟹   ENSHGLP00000008018
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247474,093,279 - 4,134,876 (-)Ensembl
RefSeq Acc Id: XM_004843359   ⟹   XP_004843416
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247474,090,664 - 4,135,822 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004843416 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004843416   ⟸   XM_004843359
RefSeq Acc Id: ENSHGLP00000008018   ⟸   ENSHGLT00000008106


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005808 Ensembl
NCBI Gene Mn1 ENTREZGENE