Mb (myoglobin) - Rat Genome Database

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Gene: Mb (myoglobin) Heterocephalus glaber
Analyze
Symbol: Mb
Name: myoglobin
RGD ID: 18932585
Description: ENCODES a protein that exhibits nitrite reductase activity (ortholog); oxygen binding (ortholog); peroxidase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); enucleate erythrocyte differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adenylosuccinase lyase deficiency (ortholog); Coronary Disease (ortholog); FOUND IN cytoplasm (inferred); extracellular exosome (inferred); sarcoplasm (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624750259,041 - 266,238 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624750259,559 - 266,124 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:26763976   PMID:30032202  


Genomics

Comparative Map Data
Mb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624750259,041 - 266,238 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624750259,559 - 266,124 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382235,606,764 - 35,623,354 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2235,606,764 - 35,637,951 (-)EnsemblGRCh38hg38GRCh38
GRCh372236,002,811 - 36,019,401 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362234,332,757 - 34,349,347 (-)NCBINCBI36Build 36hg18NCBI36
Build 342234,327,310 - 34,338,055NCBI
Celera2219,806,063 - 19,822,655 (-)NCBICelera
Cytogenetic Map22q12.3NCBI
HuRef2218,963,313 - 18,979,770 (-)NCBIHuRef
CHM1_12235,961,646 - 35,978,237 (-)NCBICHM1_1
T2T-CHM13v2.02236,065,732 - 36,082,323 (-)NCBIT2T-CHM13v2.0
Mb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391576,899,687 - 76,934,868 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1576,899,687 - 76,934,870 (-)EnsemblGRCm39 Ensembl
GRCm381577,015,487 - 77,050,668 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1577,015,487 - 77,050,670 (-)EnsemblGRCm38mm10GRCm38
MGSCv371576,845,917 - 76,881,098 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361576,842,742 - 76,877,923 (-)NCBIMGSCv36mm8
Celera1578,503,595 - 78,538,817 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1536.36NCBI
Mb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87110,640,511 - 110,647,742 (-)NCBIGRCr8
mRatBN7.27108,759,903 - 108,767,134 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7108,759,904 - 108,767,383 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7110,502,181 - 110,509,413 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07112,725,771 - 112,733,003 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07112,687,217 - 112,694,445 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07118,101,633 - 118,108,864 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7118,101,634 - 118,108,864 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07118,094,391 - 118,101,622 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47115,087,558 - 115,094,789 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17115,121,788 - 115,129,019 (-)NCBI
Celera7105,108,137 - 105,115,366 (-)NCBICelera
Cytogenetic Map7q34NCBI
Mb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540543,215,007 - 43,222,052 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540543,215,404 - 43,221,606 (-)NCBIChiLan1.0ChiLan1.0
MB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22345,546,697 - 45,557,217 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12248,243,165 - 48,253,685 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02216,612,519 - 16,645,333 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12234,452,451 - 34,485,581 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2234,452,451 - 34,463,224 (-)Ensemblpanpan1.1panPan2
MB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11028,573,819 - 28,583,526 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1028,552,749 - 28,583,522 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1028,513,611 - 28,523,318 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01029,360,185 - 29,369,892 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1029,356,425 - 29,369,888 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11029,085,598 - 29,095,292 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01029,394,667 - 29,404,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01029,575,155 - 29,584,857 (+)NCBIUU_Cfam_GSD_1.0
Mb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494511,880,637 - 11,887,251 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364924,890,871 - 4,897,665 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364924,890,871 - 4,897,665 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MB
(Sus scrofa - pig)		 No map positions available.
MB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11918,369,234 - 18,385,922 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1918,369,174 - 18,380,270 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045107,562,452 - 107,578,780 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000010298   ⟹   ENSHGLP00000010184
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624750259,041 - 266,238 (+)Ensembl
RefSeq Acc Id: NM_001310236   ⟹   NP_001297165
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624750259,559 - 266,124 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001297165 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AIZ09022 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000010184
Reference Protein Sequences
RefSeq Acc Id: NP_001297165   ⟸   NM_001310236
- UniProtKB: A0A0A7HRI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000010184   ⟸   ENSHGLT00000010298


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007308 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000010298 ENTREZGENE
Gene3D-CATH 6.10.140.2100 UniProtKB/TrEMBL
  6.10.140.2110 UniProtKB/TrEMBL
InterPro Globin UniProtKB/TrEMBL
  Globin-like_sf UniProtKB/TrEMBL
  Myoglobin UniProtKB/TrEMBL
KEGG Report hgl:101707320 UniProtKB/TrEMBL
NCBI Gene Mb ENTREZGENE
PANTHER MYOGLOBIN UniProtKB/TrEMBL
  PTHR47132 UniProtKB/TrEMBL
Pfam Globin UniProtKB/TrEMBL
PRINTS MYOGLOBIN UniProtKB/TrEMBL
PROSITE GLOBIN UniProtKB/TrEMBL
Superfamily-SCOP SSF46458 UniProtKB/TrEMBL
UniProt A0A0A7HRI5 ENTREZGENE, UniProtKB/TrEMBL