Trio (Heterocephalus glaber - naked mole-rat) |
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TRIO (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 14,143,342 - 14,510,204 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 14,143,342 - 14,532,128 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 14,143,451 - 14,510,313 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 14,196,829 - 14,562,458 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 14,196,828 - 14,562,457 | NCBI | | | | | Celera | 5 | 14,168,142 - 14,532,209 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | p15.2 | NCBI | | | | | HuRef | 5 | 14,242,473 - 14,481,695 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 14,143,936 - 14,509,323 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 14,080,499 - 14,449,245 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Trio (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 27,730,735 - 28,025,954 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 27,730,737 - 28,025,934 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 27,730,649 - 28,025,848 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 27,730,651 - 28,025,848 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 27,660,404 - 27,955,603 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 27,675,376 - 27,970,437 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 28,478,779 - 28,774,257 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | B1 | NCBI | | | | | cM Map | 15 | 10.4 | NCBI | | | | |
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Trio (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 80,235,485 - 80,531,824 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 78,505,069 - 78,801,384 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 78,505,070 - 78,803,135 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 85,573,060 - 85,868,316 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 83,694,791 - 83,990,060 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 78,761,319 - 79,056,786 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 80,471,398 - 80,769,313 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 80,473,202 - 80,667,481 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 100,137,355 - 100,437,964 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 79,634,843 - 79,832,549 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 79,581,604 - 79,878,530 (-) | NCBI | | | | | Celera | 2 | 74,141,588 - 74,436,556 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | q22 | NCBI | | | | |
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Trio (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955426 | 3,646,728 - 3,846,988 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955426 | 3,647,273 - 3,846,916 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TRIO (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 4 | 14,378,176 - 14,744,826 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 12,531,783 - 12,898,436 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 14,448,259 - 14,814,875 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 14,417,910 - 14,655,906 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 14,423,780 - 14,654,124 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TRIO (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 34 | 271,572 - 505,656 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 34 | 272,290 - 505,636 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 34 | 4,764,923 - 5,120,561 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 34 | 182,486 - 534,192 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 34 | 220,773 - 415,767 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 34 | 194,569 - 548,163 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 34 | 194,407 - 546,539 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 34 | 437,086 - 788,757 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Trio (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024407213 | 233,228,026 - 233,436,351 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936665 | 1,821,583 - 2,030,371 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936665 | 1,821,580 - 2,029,839 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TRIO (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 16 | 3,564,171 - 3,921,553 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 16 | 3,690,831 - 3,921,554 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 16 | 4,216,390 - 4,261,443 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TRIO (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 4 | 13,846,753 - 14,214,647 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 4 | 13,847,936 - 14,215,164 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666064 | 14,316,908 - 14,686,030 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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