Aipl1 (aryl hydrocarbon receptor interacting protein like 1) - Rat Genome Database

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Gene: Aipl1 (aryl hydrocarbon receptor interacting protein like 1) Heterocephalus glaber
Analyze
Symbol: Aipl1
Name: aryl hydrocarbon receptor interacting protein like 1
RGD ID: 18931111
Description: ENCODES a protein that exhibits farnesylated protein binding (inferred); peptidyl-prolyl cis-trans isomerase activity (inferred); INVOLVED IN apoptotic process (ortholog); negative regulation of apoptotic process (ortholog); phototransduction, visible light (ortholog); ASSOCIATED WITH blindness (ortholog); cone-rod dystrophy 2 (ortholog); congenital myasthenic syndrome 2A (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nuclear speck (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Aryl-hydrocarbon-interacting protein-like 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247867,579,098 - 7,587,608 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247867,579,061 - 7,587,608 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074  


Genomics

Comparative Map Data
Aipl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247867,579,098 - 7,587,608 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247867,579,061 - 7,587,608 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
AIPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38176,423,738 - 6,435,121 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl176,393,693 - 6,435,199 (-)EnsemblGRCh38hg38GRCh38
GRCh37176,327,058 - 6,338,441 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36176,267,783 - 6,279,243 (-)NCBINCBI36Build 36hg18NCBI36
Build 34176,268,594 - 6,279,173NCBI
Celera176,347,578 - 6,359,034 (-)NCBICelera
Cytogenetic Map17p13.2NCBI
HuRef176,222,412 - 6,233,862 (-)NCBIHuRef
CHM1_1176,336,287 - 6,347,951 (-)NCBICHM1_1
T2T-CHM13v2.0176,323,481 - 6,334,848 (-)NCBIT2T-CHM13v2.0
Aipl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391171,919,527 - 71,933,184 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1171,918,789 - 71,928,335 (-)EnsemblGRCm39 Ensembl
GRCm381172,028,717 - 72,042,460 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,027,963 - 72,037,509 (-)EnsemblGRCm38mm10GRCm38
MGSCv371171,842,219 - 71,851,011 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361171,845,360 - 71,853,653 (-)NCBIMGSCv36mm8
Celera1179,553,519 - 79,562,312 (-)NCBICelera
Cytogenetic Map11B4NCBI
cM Map1143.81NCBI
Aipl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81057,154,226 - 57,163,455 (-)NCBIGRCr8
mRatBN7.21056,655,693 - 56,664,922 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1056,655,693 - 56,664,922 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1061,319,640 - 61,328,871 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01060,808,127 - 60,817,358 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01056,307,175 - 56,316,410 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01058,599,690 - 58,631,194 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1058,599,856 - 58,608,907 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01058,340,638 - 58,372,167 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41058,879,846 - 58,913,985 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11058,893,468 - 58,904,116 (-)NCBI
Celera1055,786,764 - 55,818,080 (-)NCBICelera
Cytogenetic Map10q24NCBI
Aipl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546711,952,495 - 11,962,153 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546711,952,940 - 11,962,147 (-)NCBIChiLan1.0ChiLan1.0
AIPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21914,023,369 - 14,036,334 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11715,992,608 - 16,002,198 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0176,463,812 - 6,473,636 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1176,450,420 - 6,461,868 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl176,450,420 - 6,461,868 (-)Ensemblpanpan1.1panPan2
AIPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1530,824,571 - 30,835,025 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl530,824,683 - 30,834,128 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha530,958,557 - 30,966,639 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0530,928,561 - 30,936,641 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl530,930,307 - 30,935,757 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1530,893,369 - 30,901,444 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0530,852,412 - 30,860,485 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0531,025,771 - 31,033,852 (+)NCBIUU_Cfam_GSD_1.0
Aipl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560254,351,892 - 54,361,444 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366771,538,874 - 1,548,010 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366771,539,502 - 1,548,343 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AIPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1250,903,358 - 50,917,111 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11250,903,358 - 50,917,187 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21252,902,352 - 52,915,481 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AIPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,804,774 - 5,820,793 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl165,804,948 - 5,814,566 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605915,676,787 - 15,687,008 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000016743   ⟹   ENSHGLP00000016573
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247867,579,098 - 7,587,608 (+)Ensembl
RefSeq Acc Id: XM_004857265   ⟹   XP_004857322
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247867,579,061 - 7,587,608 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004857322 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB13572 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000016573
Reference Protein Sequences
RefSeq Acc Id: XP_004857322   ⟸   XM_004857265
- UniProtKB: G5BW86 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000016573   ⟸   ENSHGLT00000016743


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000011845 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000016743 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.10.50.40 UniProtKB/TrEMBL
  Tetratricopeptide repeat domain UniProtKB/TrEMBL
InterPro AIP/AIPL1/TTC9 UniProtKB/TrEMBL
  PPIase_dom_sf UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
NCBI Gene Aipl1 ENTREZGENE
PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED UniProtKB/TrEMBL
  ARYL-HYDROCARBON-INTERACTING PROTEIN-LIKE 1 UniProtKB/TrEMBL
Superfamily-SCOP FKBP-like UniProtKB/TrEMBL
  TPR-like UniProtKB/TrEMBL
UniProt G5BW86 ENTREZGENE, UniProtKB/TrEMBL