Tmem132c (transmembrane protein 132C) - Rat Genome Database

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Gene: Tmem132c (transmembrane protein 132C) Heterocephalus glaber
Analyze
Symbol: Tmem132c
Name: transmembrane protein 132C
RGD ID: 18930507
Description: ASSOCIATED WITH genetic disease (ortholog); megacolon (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474725,973,153 - 26,225,443 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474725,973,135 - 26,225,730 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

References

Genomics

Comparative Map Data
Tmem132c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474725,973,153 - 26,225,443 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474725,973,135 - 26,225,730 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
TMEM132C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812128,267,170 - 128,707,911 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12128,267,170 - 128,707,911 (+)EnsemblGRCh38hg38GRCh38
GRCh3712128,751,715 - 129,192,456 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612127,556,582 - 127,758,413 (+)NCBINCBI36Build 36hg18NCBI36
Celera12128,364,584 - 128,805,155 (+)NCBICelera
Cytogenetic Map12q24.32-q24.33NCBI
HuRef12125,993,759 - 126,177,974 (+)NCBIHuRef
HuRef12125,885,572 - 125,916,622 (+)NCBIHuRef
CHM1_112128,573,142 - 129,013,611 (+)NCBICHM1_1
T2T-CHM13v2.012128,297,066 - 128,738,704 (+)NCBIT2T-CHM13v2.0
Tmem132c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395127,318,890 - 127,642,854 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5127,318,872 - 127,642,857 (+)EnsemblGRCm39 Ensembl
GRCm385127,241,826 - 127,565,790 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5127,241,808 - 127,565,793 (+)EnsemblGRCm38mm10GRCm38
MGSCv375127,722,196 - 128,046,160 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365127,531,017 - 127,854,996 (+)NCBIMGSCv36mm8
Celera5124,274,346 - 124,596,026 (+)NCBICelera
Cytogenetic Map5G1.2NCBI
cM Map565.4NCBI
Tmem132c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81234,752,362 - 35,073,821 (-)NCBIGRCr8
mRatBN7.21229,115,213 - 29,437,900 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1229,116,467 - 29,437,870 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01232,806,372 - 33,130,746 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1232,808,022 - 33,016,885 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01234,712,179 - 35,029,549 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41230,165,347 - 30,482,653 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11230,028,698 - 30,086,591 (-)NCBI
Celera1230,800,825 - 31,124,460 (-)NCBICelera
Cytogenetic Map12q14NCBI
Tmem132c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554822,379,242 - 2,642,146 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554822,379,541 - 2,642,159 (-)NCBIChiLan1.0ChiLan1.0
TMEM132C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210136,339,003 - 136,777,905 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112136,335,535 - 136,774,425 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012125,840,379 - 126,332,293 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112130,396,094 - 130,554,642 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12130,267,934 - 130,553,021 (+)Ensemblpanpan1.1panPan2
TMEM132C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1262,890,191 - 3,089,300 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl262,890,199 - 3,089,300 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha263,093,334 - 3,292,987 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0263,142,914 - 3,343,063 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl263,142,922 - 3,441,066 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1263,074,531 - 3,276,817 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0263,172,448 - 3,372,601 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0263,082,558 - 3,285,566 (-)NCBIUU_Cfam_GSD_1.0
Tmem132c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118124,286,999 - 124,471,951 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936660155,204 - 432,640 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936660343,825 - 434,088 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM132C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1426,209,565 - 26,611,610 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11426,209,553 - 26,611,549 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21427,858,677 - 27,873,061 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM132C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111123,657,734 - 124,087,650 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037121,206,340 - 121,657,764 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000015296   ⟹   ENSHGLP00000015142
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474725,973,153 - 26,225,443 (+)Ensembl
RefSeq Acc Id: XM_013071849   ⟹   XP_012927303
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474725,973,135 - 26,225,730 (+)NCBI
RefSeq Acc Id: XM_021257659   ⟹   XP_021113318
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474725,973,135 - 26,225,730 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012927303 (Get FASTA)   NCBI Sequence Viewer  
  XP_021113318 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000015142
Reference Protein Sequences
RefSeq Acc Id: XP_021113318   ⟸   XM_021257659
- Peptide Label: isoform X1
- UniProtKB: G5AWV3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012927303   ⟸   XM_013071849
- Peptide Label: isoform X2
- UniProtKB: G5AWV3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000015142   ⟸   ENSHGLT00000015296


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000010846 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000015296 ENTREZGENE
InterPro TMEM132 UniProtKB/TrEMBL
  TMEM132_C UniProtKB/TrEMBL
  TMEM132_M UniProtKB/TrEMBL
  TMEM132_N UniProtKB/TrEMBL
NCBI Gene Tmem132c ENTREZGENE
PANTHER TRANSMEMBRANE PROTEIN 132C UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam TMEM132 UniProtKB/TrEMBL
  TMEM132D_C UniProtKB/TrEMBL
  TMEM132D_N UniProtKB/TrEMBL
UniProt G5AWV3 ENTREZGENE, UniProtKB/TrEMBL