Gene: LOC101717541 (olfactory receptor 6Q1) Heterocephalus glaber |
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Analyze |
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Symbol: |
LOC101717541 |
Name: |
olfactory receptor 6Q1 |
RGD ID: |
18929657 |
Description: |
ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly |
Position: |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
LOC101717541 (Heterocephalus glaber - naked mole-rat) |
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OR6Q1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 58,030,953 - 58,031,906 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 58,030,953 - 58,031,906 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 57,798,425 - 57,799,378 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 57,555,001 - 57,555,954 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 57,555,000 - 57,555,954 | NCBI | | | | | Celera | 11 | 55,155,488 - 55,156,441 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q12.1 | NCBI | | | | | HuRef | 11 | 54,147,791 - 54,148,744 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 57,665,494 - 57,666,447 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 57,981,302 - 57,982,255 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Or6ae1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 139,741,923 - 139,742,861 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 139,739,912 - 139,744,677 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 140,162,010 - 140,162,948 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 140,159,999 - 140,164,764 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 147,347,909 - 147,348,847 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 140,013,330 - 140,014,268 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 139,960,491 - 139,961,429 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | F4 | NCBI | | | | | cM Map | 7 | 85.19 | NCBI | | | | |
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Or6ae1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 204,386,790 - 204,387,728 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 194,957,151 - 194,958,089 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 194,957,151 - 194,958,089 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 203,318,079 - 203,319,017 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 210,447,555 - 210,448,493 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 203,121,394 - 203,122,332 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 212,632,366 - 212,633,304 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 212,632,366 - 212,633,304 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 219,547,270 - 219,548,208 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 199,965,626 - 199,966,564 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 200,115,617 - 200,116,556 (-) | NCBI | | | | | Celera | 1 | 192,634,442 - 192,635,380 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q41 | NCBI | | | | |
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LOC102024938 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955511 | 2,822,503 - 2,823,456 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955511 | 2,822,493 - 2,823,456 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100985834 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 59,186,088 - 59,187,811 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 60,212,245 - 60,213,968 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 53,276,707 - 53,277,809 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 56,739,807 - 56,740,796 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 56,739,824 - 56,740,777 (+) | Ensembl | panpan1.1 | | panPan2 | |
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OR6Q1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 38,284,202 - 38,285,308 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 38,284,202 - 38,285,155 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 37,828,196 - 37,829,149 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 38,963,125 - 38,964,078 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 38,963,125 - 38,964,078 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 38,546,406 - 38,547,359 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 38,119,488 - 38,120,441 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 38,746,695 - 38,747,648 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LOC101966731 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 14,497,584 - 14,500,007 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936581 | 4,612,582 - 4,613,535 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936581 | 4,612,560 - 4,613,546 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LOC100620717 (Sus scrofa - pig) |
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LOC103235225 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 15,203,972 - 15,205,461 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 15,204,089 - 15,205,273 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 112,515,126 - 112,516,345 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Expression
Sequence
RefSeq Acc Id: |
XM_013067468 ⟹ XP_012922922 |
Type: |
CODING |
Position: |
Naked Mole-Rat Assembly | Chr | Position (strand) | Source |
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HetGla 1.0 | NW_004624864 | 2,820,035 - 2,824,455 (-) | NCBI |
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RefSeq Acc Id: |
XM_021248337 ⟹ XP_021103996 |
Type: |
CODING |
Position: |
Naked Mole-Rat Assembly | Chr | Position (strand) | Source |
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HetGla 1.0 | NW_004624864 | 2,820,035 - 2,827,700 (-) | NCBI |
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RefSeq Acc Id: |
XP_021103996 ⟸ XM_021248337 |
RefSeq Acc Id: |
XP_012922922 ⟸ XM_013067468 |
Additional Information
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