Dnaja2 (DnaJ heat shock protein family (Hsp40) member A2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Dnaja2 (DnaJ heat shock protein family (Hsp40) member A2) Heterocephalus glaber
Analyze
Symbol: Dnaja2
Name: DnaJ heat shock protein family (Hsp40) member A2
RGD ID: 18929115
Description: ENCODES a protein that exhibits ATP binding (inferred); ATPase activator activity (inferred); heat shock protein binding (inferred); INVOLVED IN carbon tetrachloride metabolic process (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease IXB (ortholog); liver disease (ortholog); FOUND IN cytosol (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dnaJ homolog subfamily A member 2; DnaJ-like protein subfamily A member 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624914517,961 - 534,512 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624914518,593 - 534,527 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA)
membrane  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Dnaja2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624914517,961 - 534,512 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624914518,593 - 534,527 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
DNAJA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381646,955,362 - 46,973,674 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1646,955,362 - 46,973,674 (-)EnsemblGRCh38hg38GRCh38
GRCh371646,989,274 - 47,007,585 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361645,546,775 - 45,565,126 (-)NCBINCBI36Build 36hg18NCBI36
Build 341645,547,795 - 45,565,036NCBI
Celera1631,497,392 - 31,515,743 (-)NCBICelera
Cytogenetic Map16q11.2NCBI
HuRef1632,879,590 - 32,897,952 (-)NCBIHuRef
CHM1_11648,396,273 - 48,414,621 (-)NCBICHM1_1
T2T-CHM13v2.01652,752,176 - 52,770,493 (-)NCBIT2T-CHM13v2.0
Dnaja2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39886,264,262 - 86,281,990 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl886,264,262 - 86,281,973 (-)EnsemblGRCm39 Ensembl
GRCm38885,537,633 - 85,555,361 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl885,537,633 - 85,555,344 (-)EnsemblGRCm38mm10GRCm38
MGSCv37888,061,539 - 88,079,170 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36888,427,745 - 88,445,376 (-)NCBIMGSCv36mm8
Celera889,834,255 - 89,851,758 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.61NCBI
Dnaja2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81937,671,019 - 37,689,163 (+)NCBIGRCr8
mRatBN7.21921,497,792 - 21,516,904 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1921,497,729 - 21,516,901 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1923,187,280 - 23,205,448 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01928,381,803 - 28,399,971 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01931,344,590 - 31,362,759 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01922,569,999 - 22,588,143 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1922,569,999 - 22,588,137 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01933,576,436 - 33,594,580 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41922,853,702 - 22,871,846 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11922,858,527 - 22,876,671 (+)NCBI
Celera1921,358,547 - 21,376,691 (+)NCBICelera
Cytogenetic Map19p11NCBI
Dnaja2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554748,180,995 - 8,202,267 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554748,180,995 - 8,202,169 (+)NCBIChiLan1.0ChiLan1.0
DNAJA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21856,417,398 - 56,436,339 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11662,322,325 - 62,341,277 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01627,223,414 - 27,240,726 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11646,113,238 - 46,130,028 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1646,113,088 - 46,130,028 (-)Ensemblpanpan1.1panPan2
DNAJA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1267,903,292 - 67,916,267 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha264,478,251 - 64,494,696 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0268,460,779 - 68,477,225 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1265,273,419 - 65,289,848 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0266,296,767 - 66,313,250 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0267,288,195 - 67,304,637 (+)NCBIUU_Cfam_GSD_1.0
Dnaja2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934959,238,017 - 59,254,800 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936475335,851 - 350,933 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936475334,275 - 351,051 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAJA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl637,591,916 - 37,608,361 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1637,584,012 - 37,606,198 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2632,929,182 - 32,943,460 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNAJA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1532,815,641 - 32,834,385 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604743,735,497 - 43,753,794 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000003047   ⟹   ENSHGLP00000002993
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624914517,961 - 534,512 (-)Ensembl
RefSeq Acc Id: XM_004873891   ⟹   XP_004873948
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624914518,593 - 534,527 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004873948 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB06257 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000002993
  ENSHGLP00100000541
GenBank Protein JAO03170 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004873948   ⟸   XM_004873891
- UniProtKB: G5BAE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000002993   ⟸   ENSHGLT00000003047


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002235 Ensembl, ENTREZGENE
  ENSHGLG00100000456 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000003047 ENTREZGENE
  ENSHGLT00100000572 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.110 UniProtKB/TrEMBL
  Heat shock protein DnaJ, cysteine-rich domain UniProtKB/TrEMBL
  Urease metallochaperone UreE, N-terminal domain UniProtKB/TrEMBL
InterPro DnaJ UniProtKB/TrEMBL
  DnaJ_C UniProtKB/TrEMBL
  DnaJ_domain UniProtKB/TrEMBL
  DnaJ_domain_CS UniProtKB/TrEMBL
  DNJA1/2-like UniProtKB/TrEMBL
  HSP40/DnaJ_pept-bd UniProtKB/TrEMBL
  HSP_DnaJ_Cys-rich_dom UniProtKB/TrEMBL
  HSP_DnaJ_Cys-rich_dom_sf UniProtKB/TrEMBL
  J_dom_sf UniProtKB/TrEMBL
KEGG Report hgl:101699482 UniProtKB/TrEMBL
NCBI Gene Dnaja2 ENTREZGENE
PANTHER DNAJ HOMOLOG SUBFAMILY A MEMBER 2 UniProtKB/TrEMBL
  PTHR43888 UniProtKB/TrEMBL
Pfam DnaJ UniProtKB/TrEMBL
  DnaJ_C UniProtKB/TrEMBL
  DnaJ_CXXCXGXG UniProtKB/TrEMBL
PRINTS JDOMAIN UniProtKB/TrEMBL
PROSITE DNAJ_1 UniProtKB/TrEMBL
  DNAJ_2 UniProtKB/TrEMBL
  ZF_CR UniProtKB/TrEMBL
SMART DnaJ UniProtKB/TrEMBL
Superfamily-SCOP SSF46565 UniProtKB/TrEMBL
  SSF49493 UniProtKB/TrEMBL
  SSF57938 UniProtKB/TrEMBL
UniProt G5BAE6 ENTREZGENE, UniProtKB/TrEMBL