Tmem68 (transmembrane protein 68) - Rat Genome Database

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Gene: Tmem68 (transmembrane protein 68) Heterocephalus glaber
Analyze
Symbol: Tmem68
Name: transmembrane protein 68
RGD ID: 18928580
Description: ENCODES a protein that exhibits phospholipid:diacylglycerol acyltransferase activity (ortholog); INVOLVED IN triglyceride biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624965120,911 - 147,945 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624965120,862 - 148,769 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Tmem68
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624965120,911 - 147,945 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624965120,862 - 148,769 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
TMEM68
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38855,738,758 - 55,773,378 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl855,696,424 - 55,773,407 (-)EnsemblGRCh38hg38GRCh38
GRCh37856,651,317 - 56,685,937 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36856,813,874 - 56,848,439 (-)NCBINCBI36Build 36hg18NCBI36
Celera852,641,534 - 52,677,152 (-)NCBICelera
Cytogenetic Map8q12.1NCBI
HuRef852,119,027 - 52,154,339 (-)NCBIHuRef
CHM1_1856,703,016 - 56,737,479 (-)NCBICHM1_1
T2T-CHM13v2.0856,116,033 - 56,150,430 (-)NCBIT2T-CHM13v2.0
Tmem68
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3943,549,041 - 3,574,853 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl43,549,041 - 3,574,853 (-)EnsemblGRCm39 Ensembl
GRCm3843,549,041 - 3,574,867 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl43,549,041 - 3,574,853 (-)EnsemblGRCm38mm10GRCm38
MGSCv3743,476,188 - 3,501,915 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3643,476,188 - 3,501,915 (-)NCBIMGSCv36mm8
Celera43,493,982 - 3,520,608 (-)NCBICelera
Cytogenetic Map4A1NCBI
cM Map41.98NCBI
Tmem68
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8521,291,675 - 21,322,443 (-)NCBIGRCr8
mRatBN7.2516,494,054 - 16,524,842 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl516,494,276 - 16,524,569 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx518,742,633 - 18,773,416 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0520,341,122 - 20,371,905 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0520,092,601 - 20,123,380 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0516,363,908 - 16,413,307 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl516,382,538 - 16,413,307 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0521,163,802 - 21,194,571 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4516,787,573 - 16,818,342 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1516,789,003 - 16,818,154 (-)NCBI
Celera515,860,301 - 15,891,085 (-)NCBICelera
Cytogenetic Map5q12NCBI
Tmem68
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545414,857,396 - 14,895,250 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545414,857,918 - 14,895,250 (-)NCBIChiLan1.0ChiLan1.0
TMEM68
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2771,346,928 - 71,425,682 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1847,071,305 - 47,150,464 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0852,135,766 - 52,214,537 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1849,549,585 - 49,586,260 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl849,549,593 - 49,586,260 (-)Ensemblpanpan1.1panPan2
TMEM68
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1297,192,130 - 7,241,010 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl297,160,489 - 7,232,126 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha297,505,747 - 7,553,987 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0297,266,356 - 7,314,648 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl297,266,213 - 7,314,606 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1297,280,929 - 7,329,078 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0297,413,655 - 7,461,856 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0297,690,072 - 7,738,304 (-)NCBIUU_Cfam_GSD_1.0
Tmem68
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530372,300,823 - 72,332,471 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364962,452,990 - 2,485,166 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364962,453,014 - 2,484,637 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM68
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl475,969,247 - 76,001,178 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1475,969,201 - 76,003,917 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2482,911,899 - 82,943,871 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM68
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1851,781,021 - 51,819,454 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl851,782,434 - 51,807,062 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603989,984,064 - 90,022,744 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000000337   ⟹   ENSHGLP00000000303
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624965120,911 - 147,945 (+)Ensembl
RefSeq Acc Id: XM_013069456   ⟹   XP_012924910
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624965120,862 - 148,769 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012924910 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000000303
Reference Protein Sequences
RefSeq Acc Id: XP_012924910   ⟸   XM_013069456
RefSeq Acc Id: ENSHGLP00000000303   ⟸   ENSHGLT00000000337


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000000295 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000000337 ENTREZGENE
NCBI Gene Tmem68 ENTREZGENE