Eid3 (EP300 interacting inhibitor of differentiation 3) - Rat Genome Database

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Gene: Eid3 (EP300 interacting inhibitor of differentiation 3) Heterocephalus glaber
Analyze
Symbol: Eid3
Name: EP300 interacting inhibitor of differentiation 3
RGD ID: 18928508
Description: INVOLVED IN DNA damage response (inferred); DNA recombination (inferred); DNA repair (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: EP300-interacting inhibitor of differentiation 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247504,478,911 - 4,479,872 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247504,478,753 - 4,482,276 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Eid3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247504,478,911 - 4,479,872 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247504,478,753 - 4,482,276 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
EID3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812104,303,739 - 104,305,205 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12104,303,739 - 104,305,205 (+)EnsemblGRCh38hg38GRCh38
GRCh3712104,697,517 - 104,698,983 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612103,221,679 - 103,223,113 (+)NCBINCBI36Build 36hg18NCBI36
Celera12104,361,247 - 104,362,681 (+)NCBICelera
Cytogenetic Map12q23.3NCBI
HuRef12101,757,788 - 101,759,261 (+)NCBIHuRef
CHM1_112104,663,356 - 104,664,829 (+)NCBICHM1_1
T2T-CHM13v2.012104,265,457 - 104,266,923 (+)NCBIT2T-CHM13v2.0
Eid3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391082,702,460 - 82,703,764 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1082,702,460 - 82,703,764 (+)EnsemblGRCm39 Ensembl
GRCm381082,866,626 - 82,867,930 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1082,866,626 - 82,867,930 (+)EnsemblGRCm38mm10GRCm38
MGSCv371082,329,371 - 82,330,675 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361082,296,457 - 82,297,726 (+)NCBIMGSCv36mm8
Celera1084,851,342 - 84,852,646 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1040.66NCBI
Eid3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8722,747,645 - 22,748,967 (-)NCBIGRCr8
mRatBN7.2720,860,073 - 20,861,395 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx722,824,046 - 22,825,371 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0724,986,818 - 24,988,143 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0724,763,829 - 24,765,154 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0726,976,154 - 26,977,479 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0727,095,849 - 27,097,174 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4723,085,569 - 23,086,894 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera718,039,933 - 18,041,258 (-)NCBICelera
Cytogenetic Map7q13NCBI
Eid3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540538,897,494 - 38,898,057 (+)NCBIChiLan1.0ChiLan1.0
EID3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11033,955,843 - 33,957,527 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1033,876,053 - 33,877,730 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01034,799,214 - 34,800,900 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11034,534,042 - 34,535,728 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01034,817,607 - 34,819,293 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01035,012,442 - 35,014,128 (-)NCBIUU_Cfam_GSD_1.0
Eid3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494517,220,912 - 17,223,142 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649210,232,335 - 10,233,438 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649210,232,140 - 10,233,557 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EID3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1580,221,334 - 80,234,567 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2583,725,886 - 83,727,438 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EID3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_023666037145,489,833 - 145,492,863 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004844823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01030352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000011405   ⟹   ENSHGLP00000011279
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247504,478,911 - 4,479,872 (-)Ensembl
RefSeq Acc Id: XM_004844823   ⟹   XP_004844880
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247504,478,753 - 4,482,276 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004844880 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004844880   ⟸   XM_004844823
- UniProtKB: G5AR45 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000011279   ⟸   ENSHGLT00000011405


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008093 Ensembl
InterPro Nse4/EID UniProtKB/TrEMBL
  Nse4_C UniProtKB/TrEMBL
  Nse4_Nse3-bd UniProtKB/TrEMBL
NCBI Gene Eid3 ENTREZGENE
PANTHER EP300-INTERACTING INHIBITOR OF DIFFERENTIATION 3 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam Nse4-Nse3_bdg UniProtKB/TrEMBL
  Nse4_C UniProtKB/TrEMBL
UniProt G5AR45 ENTREZGENE, UniProtKB/TrEMBL