Entpd7 (ectonucleoside triphosphate diphosphohydrolase 7) - Rat Genome Database

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Gene: Entpd7 (ectonucleoside triphosphate diphosphohydrolase 7) Heterocephalus glaber
Analyze
Symbol: Entpd7
Name: ectonucleoside triphosphate diphosphohydrolase 7
RGD ID: 18928328
Description: ENCODES a protein that exhibits CTPase activity (ortholog); GTPase activity (ortholog); INVOLVED IN CTP catabolic process (ortholog); GTP metabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); ASSOCIATED WITH Leigh disease (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473711,361,737 - 11,428,288 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473711,361,248 - 11,430,476 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Entpd7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473711,361,737 - 11,428,288 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473711,361,248 - 11,430,476 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ENTPD7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381099,659,509 - 99,711,241 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1099,659,509 - 99,711,241 (+)EnsemblGRCh38hg38GRCh38
GRCh3710101,419,266 - 101,470,998 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610101,409,253 - 101,455,454 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410101,409,252 - 101,455,451NCBI
Celera1095,156,667 - 95,208,386 (+)NCBICelera
Cytogenetic Map10q24.2NCBI
HuRef1095,046,702 - 95,098,471 (+)NCBIHuRef
CHM1_110101,701,792 - 101,753,489 (+)NCBICHM1_1
T2T-CHM13v2.010100,542,513 - 100,594,231 (+)NCBIT2T-CHM13v2.0
Entpd7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391943,678,128 - 43,722,292 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1943,678,111 - 43,722,136 (+)EnsemblGRCm39 Ensembl
GRCm381943,689,689 - 43,733,853 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1943,689,672 - 43,733,697 (+)EnsemblGRCm38mm10GRCm38
MGSCv371943,764,179 - 43,808,343 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361943,743,136 - 43,787,008 (+)NCBIMGSCv36mm8
Celera1944,476,312 - 44,521,784 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1936.67NCBI
Entpd7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81252,508,594 - 252,550,269 (+)NCBIGRCr8
mRatBN7.21242,559,365 - 242,601,044 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1242,559,365 - 242,601,447 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1250,708,737 - 250,750,020 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01257,405,767 - 257,446,954 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01250,058,891 - 250,100,169 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01263,448,633 - 263,490,308 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1262,987,957 - 263,000,254 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1263,448,633 - 263,490,308 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01270,428,549 - 270,446,394 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01270,893,394 - 270,935,069 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41247,098,299 - 247,141,414 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11247,213,221 - 247,255,800 (-)NCBI
Celera1238,379,310 - 238,419,995 (+)NCBICelera
Cytogenetic Map1q54NCBI
Entpd7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555075,552,764 - 5,594,911 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555075,552,788 - 5,594,911 (+)NCBIChiLan1.0ChiLan1.0
ENTPD7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28111,568,350 - 111,615,258 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110111,573,735 - 111,620,578 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01096,276,454 - 96,323,287 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11099,768,566 - 99,820,155 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1099,768,566 - 99,813,568 (+)Ensemblpanpan1.1panPan2
ENTPD7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12812,565,173 - 12,601,152 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2812,564,727 - 12,600,240 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2812,748,502 - 12,786,224 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02813,032,500 - 13,070,585 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2813,032,555 - 13,072,831 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12812,579,523 - 12,617,469 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02812,610,674 - 12,648,396 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02812,752,062 - 12,789,972 (+)NCBIUU_Cfam_GSD_1.0
Entpd7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721334,367,913 - 34,407,076 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936636407,186 - 446,125 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936636406,389 - 446,167 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ENTPD7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14110,827,914 - 110,882,575 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114110,827,833 - 110,877,972 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214120,274,071 - 120,324,179 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ENTPD7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1992,722,960 - 92,769,563 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl992,723,015 - 92,768,558 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604853,721,119 - 53,772,320 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000025226   ⟹   ENSHGLP00000025004
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473711,361,737 - 11,428,288 (+)Ensembl
RefSeq Acc Id: XM_013069811   ⟹   XP_012925265
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473711,361,248 - 11,430,476 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012925265 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000025004
RefSeq Acc Id: XP_012925265   ⟸   XM_013069811
- UniProtKB: A0AAX6QS03 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000025004   ⟸   ENSHGLT00000025226


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000017820 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000025226 ENTREZGENE
NCBI Gene Entpd7 ENTREZGENE
UniProt A0AAX6QS03 ENTREZGENE, UniProtKB/TrEMBL