Fpgt (fucose-1-phosphate guanylyltransferase) - Rat Genome Database

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Gene: Fpgt (fucose-1-phosphate guanylyltransferase) Heterocephalus glaber
Analyze
Symbol: Fpgt
Name: fucose-1-phosphate guanylyltransferase
RGD ID: 18928234
Description: ENCODES a protein that exhibits fucose-1-phosphate guanylyltransferase activity (ortholog); INVOLVED IN L-fucose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH genetic disease (ortholog); renal cell carcinoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474222,463,143 - 22,471,660 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474222,463,878 - 22,471,732 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Fpgt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474222,463,143 - 22,471,660 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474222,463,878 - 22,471,732 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FPGT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38174,198,242 - 74,208,702 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl174,198,238 - 74,234,086 (+)EnsemblGRCh38hg38GRCh38
GRCh37174,663,926 - 74,674,386 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,436,514 - 74,445,708 (+)NCBINCBI36Build 36hg18NCBI36
Build 34174,375,946 - 74,384,845NCBI
Celera172,909,489 - 72,918,673 (+)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef172,798,796 - 72,809,184 (+)NCBIHuRef
CHM1_1174,779,575 - 74,790,046 (+)NCBICHM1_1
T2T-CHM13v2.0174,039,794 - 74,050,235 (+)NCBIT2T-CHM13v2.0
Fpgt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393154,790,552 - 154,799,024 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3154,790,555 - 154,799,040 (-)EnsemblGRCm39 Ensembl
GRCm383155,084,915 - 155,093,387 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3155,084,918 - 155,093,403 (-)EnsemblGRCm38mm10GRCm38
MGSCv373154,747,882 - 154,756,342 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363155,020,206 - 155,028,696 (-)NCBIMGSCv36mm8
Celera3161,542,885 - 161,551,345 (-)NCBICelera
Cytogenetic Map3H4NCBI
cM Map379.53NCBI
Fpgt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82246,757,982 - 246,778,896 (-)NCBIGRCr8
mRatBN7.22244,099,031 - 244,119,967 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2244,099,076 - 244,119,899 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2251,861,151 - 251,882,057 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02249,754,957 - 249,775,861 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02244,695,344 - 244,716,234 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02261,382,015 - 261,402,950 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2261,382,060 - 261,402,903 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02280,053,847 - 280,074,755 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42252,878,847 - 252,885,883 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12252,893,453 - 252,900,490 (-)NCBI
Celera2235,972,365 - 235,979,401 (-)NCBICelera
Cytogenetic Map2q45NCBI
Fpgt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542318,431,717 - 18,439,673 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542318,430,520 - 18,438,760 (-)NCBIChiLan1.0ChiLan1.0
FPGT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1672,107,789 - 72,138,834 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl672,124,609 - 72,138,778 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha674,798,273 - 74,804,448 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0672,703,766 - 72,734,815 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl672,720,531 - 72,734,832 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1672,249,615 - 72,255,781 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0672,168,805 - 72,174,986 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0672,664,485 - 72,670,660 (-)NCBIUU_Cfam_GSD_1.0
Fpgt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505886,012,381 - 86,020,340 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365711,522,741 - 1,530,725 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365711,522,765 - 1,530,418 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FPGT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6138,940,486 - 138,950,356 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16138,941,832 - 138,950,340 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26128,714,260 - 128,722,771 (-)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013070961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01020904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000012840   ⟹   ENSHGLP00000012703
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474222,463,143 - 22,471,660 (-)Ensembl
RefSeq Acc Id: XM_013070961   ⟹   XP_012926415
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474222,463,878 - 22,471,732 (-)NCBI
Protein Sequences
Protein RefSeqs XP_012926415 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000012703
Reference Protein Sequences
RefSeq Acc Id: XP_012926415   ⟸   XM_013070961
RefSeq Acc Id: ENSHGLP00000012703   ⟸   ENSHGLT00000012840


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000009086 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000012840 ENTREZGENE
NCBI Gene Fpgt ENTREZGENE