Gucy1a2 (guanylate cyclase 1 soluble subunit alpha 2) - Rat Genome Database

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Gene: Gucy1a2 (guanylate cyclase 1 soluble subunit alpha 2) Heterocephalus glaber
Analyze
Symbol: Gucy1a2
Name: guanylate cyclase 1 soluble subunit alpha 2
RGD ID: 18928208
Description: ENCODES a protein that exhibits guanylate cyclase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN nitric oxide mediated signal transduction (ortholog); positive regulation of nitric oxide mediated signal transduction (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); Breast Neoplasms (ortholog); Chromosome 11, Partial Trisomy 11q (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Guanylate cyclase soluble subunit alpha-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247841,452,008 - 1,796,252 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247841,449,275 - 1,796,331 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gucy1a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247841,452,008 - 1,796,252 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247841,449,275 - 1,796,331 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GUCY1A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811106,674,019 - 107,018,476 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11106,674,019 - 107,018,476 (-)EnsemblGRCh38hg38GRCh38
GRCh3711106,544,745 - 106,889,202 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611106,063,120 - 106,394,381 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411106,063,119 - 106,394,381NCBI
Celera11103,723,340 - 104,055,014 (-)NCBICelera
Cytogenetic Map11q22.3NCBI
HuRef11102,477,634 - 102,824,743 (-)NCBIHuRef
CHM1_111106,428,121 - 106,772,413 (-)NCBICHM1_1
T2T-CHM13v2.011106,680,493 - 107,025,581 (-)NCBIT2T-CHM13v2.0
Gucy1a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3993,532,349 - 3,905,791 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl93,532,778 - 3,894,736 (+)EnsemblGRCm39 Ensembl
GRCm3893,532,349 - 3,905,791 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl93,532,778 - 3,894,736 (+)EnsemblGRCm38mm10GRCm38
MGSCv3793,532,354 - 3,897,342 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3693,532,778 - 3,905,782 (+)NCBIMGSCv36mm8
Celera3118,798,542 - 119,162,647 (-)NCBICelera
Cytogenetic Map9A1NCBI
cM Map92.14NCBI
Gucy1a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr888,785,212 - 9,174,322 (+)NCBIGRCr8
mRatBN7.28500,212 - 900,201 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8500,212 - 889,203 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx84,342,420 - 4,731,628 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.082,640,170 - 3,029,370 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08573,510 - 962,390 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08408,001 - 899,851 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8408,001 - 899,974 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08417,520 - 903,360 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,253 - 262,544 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,252 - 262,544 (+)NCBI
Celera8386,346 - 771,749 (+)NCBICelera
Cytogenetic Map8q11NCBI
Gucy1a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554129,225,305 - 9,480,206 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554129,218,029 - 9,480,333 (-)NCBIChiLan1.0ChiLan1.0
GUCY1A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29107,423,265 - 107,768,129 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111108,518,712 - 108,863,579 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011101,565,279 - 101,910,136 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111105,060,684 - 105,394,346 (-)NCBIpanpan1.1PanPan1.1panPan2
GUCY1A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1525,291,019 - 25,718,918 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl525,291,583 - 25,686,947 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha525,216,400 - 25,557,679 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0525,315,662 - 25,746,950 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl525,316,274 - 25,715,102 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1525,369,411 - 25,798,051 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0525,255,743 - 25,598,578 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0525,321,581 - 25,750,065 (+)NCBIUU_Cfam_GSD_1.0
Gucy1a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494789,719,092 - 89,961,167 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365511,575,356 - 1,814,697 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365511,573,930 - 1,814,685 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GUCY1A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl962,101,613 - 62,499,581 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1962,101,581 - 62,510,803 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2968,952,382 - 69,391,579 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GUCY1A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1198,108,081 - 98,439,453 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604327,490,497 - 27,809,576 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004856489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01060480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AHKG01060508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH169218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000024731   ⟹   ENSHGLP00000024510
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247841,452,008 - 1,796,252 (-)Ensembl
RefSeq Acc Id: XM_004856489   ⟹   XP_004856546
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247841,449,275 - 1,796,331 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004856546 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB06184 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000024510
Reference Protein Sequences
RefSeq Acc Id: XP_004856546   ⟸   XM_004856489
RefSeq Acc Id: ENSHGLP00000024510   ⟸   ENSHGLT00000024731


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000017468 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000024731 ENTREZGENE
NCBI Gene Gucy1a2 ENTREZGENE