Rspo2 (R-spondin 2) - Rat Genome Database

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Gene: Rspo2 (R-spondin 2) Heterocephalus glaber
Analyze
Symbol: Rspo2
Name: R-spondin 2
RGD ID: 18927826
Description: ENCODES a protein that exhibits heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); dopaminergic neuron differentiation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH genetic disease (ortholog); Humerofemoral Hypoplasia with Radiotibial Ray Deficiency (ortholog); tetraamelia syndrome 2 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: R-spondin-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476323,067,691 - 23,182,059 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476323,067,682 - 23,182,945 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Rspo2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476323,067,691 - 23,182,059 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476323,067,682 - 23,182,945 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RSPO2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388107,899,316 - 108,083,620 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8107,899,316 - 108,083,642 (-)EnsemblGRCh38hg38GRCh38
GRCh378108,911,544 - 109,095,848 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368108,980,721 - 109,164,742 (-)NCBINCBI36Build 36hg18NCBI36
Celera8105,098,134 - 105,283,118 (-)NCBICelera
Cytogenetic Map8q23.1NCBI
HuRef8104,233,209 - 104,418,017 (-)NCBIHuRef
CHM1_18108,951,793 - 109,136,161 (-)NCBICHM1_1
T2T-CHM13v2.08109,027,818 - 109,212,087 (-)NCBIT2T-CHM13v2.0
Rspo2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391542,884,184 - 43,034,990 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1542,884,190 - 43,034,222 (-)EnsemblGRCm39 Ensembl
GRCm381543,020,788 - 43,171,594 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1543,020,794 - 43,170,826 (-)EnsemblGRCm38mm10GRCm38
MGSCv371542,852,341 - 43,002,364 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361542,850,869 - 43,000,892 (-)NCBIMGSCv36mm8
Celera1543,503,080 - 43,653,511 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1516.73NCBI
Rspo2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8775,987,217 - 76,123,984 (-)NCBIGRCr8
mRatBN7.2774,096,378 - 74,239,398 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl774,103,090 - 74,238,933 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx776,004,762 - 76,090,437 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0778,207,236 - 78,292,913 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0778,075,318 - 78,160,987 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0781,919,911 - 82,059,659 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl781,924,050 - 82,059,789 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0781,937,691 - 82,077,651 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4778,826,526 - 78,912,786 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera771,160,894 - 71,246,191 (-)NCBICelera
Cytogenetic Map7q31NCBI
Rspo2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541730,643,554 - 30,704,497 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541730,643,554 - 30,704,497 (-)NCBIChiLan1.0ChiLan1.0
RSPO2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27125,261,051 - 125,444,668 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18100,782,739 - 100,968,263 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08104,535,751 - 104,721,463 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18106,685,116 - 106,870,494 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8106,685,116 - 106,870,494 (-)Ensemblpanpan1.1panPan2
RSPO2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1138,610,227 - 8,755,727 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl138,611,952 - 8,754,859 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha138,550,551 - 8,728,117 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0138,873,544 - 9,022,401 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl138,874,544 - 9,021,570 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1138,627,417 - 8,772,877 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0138,745,404 - 8,896,677 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0138,823,008 - 8,971,462 (-)NCBIUU_Cfam_GSD_1.0
Rspo2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530329,254,327 - 29,390,001 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647036,681,506 - 36,814,626 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647036,680,716 - 36,815,347 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RSPO2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl429,414,752 - 29,579,674 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1429,415,774 - 29,577,890 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2431,802,835 - 31,967,808 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RSPO2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18102,632,060 - 102,804,181 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8102,632,060 - 102,801,911 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603937,778,158 - 37,953,383 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000011854   ⟹   ENSHGLP00000011726
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476323,067,691 - 23,182,059 (-)Ensembl
RefSeq Acc Id: XM_004850282   ⟹   XP_004850339
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476323,067,682 - 23,182,096 (-)NCBI
RefSeq Acc Id: XM_021262811   ⟹   XP_021118470
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476323,067,682 - 23,182,945 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004850339 (Get FASTA)   NCBI Sequence Viewer  
  XP_021118470 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000011726
Reference Protein Sequences
RefSeq Acc Id: XP_021118470   ⟸   XM_021262811
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004850339   ⟸   XM_004850282
- Peptide Label: isoform X1
RefSeq Acc Id: ENSHGLP00000011726   ⟸   ENSHGLT00000011854


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008406 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000011854 ENTREZGENE
NCBI Gene Rspo2 ENTREZGENE