Piwil3 (piwi like RNA-mediated gene silencing 3) - Rat Genome Database

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Gene: Piwil3 (piwi like RNA-mediated gene silencing 3) Heterocephalus glaber
Analyze
Symbol: Piwil3
Name: piwi like RNA-mediated gene silencing 3
RGD ID: 18927539
Description: ASSOCIATED WITH genetic disease (ortholog); oligospermia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: piwi-like protein 3
RGD Orthologs
Human
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474712,587,798 - 12,629,494 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO)
nucleus  (ISO)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Piwil3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474712,587,798 - 12,629,494 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PIWIL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382224,719,034 - 24,774,720 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2224,719,034 - 24,774,720 (-)EnsemblGRCh38hg38GRCh38
GRCh372225,115,001 - 25,170,687 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362223,445,001 - 23,500,683 (-)NCBINCBI36Build 36hg18NCBI36
Build 342223,439,554 - 23,495,237NCBI
Celera228,919,401 - 8,975,139 (-)NCBICelera
Cytogenetic Map22q11.23NCBI
HuRef228,063,447 - 8,119,140 (-)NCBIHuRef
CHM1_12225,073,992 - 25,129,703 (-)NCBICHM1_1
T2T-CHM13v2.02225,180,480 - 25,236,180 (-)NCBIT2T-CHM13v2.0
PIWIL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22334,622,587 - 34,705,478 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12237,320,755 - 37,403,651 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0225,678,784 - 5,721,948 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12223,347,633 - 23,390,380 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2223,347,633 - 23,390,380 (-)Ensemblpanpan1.1panPan2
LOC486307
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12617,035,530 - 17,063,177 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2617,036,963 - 17,061,992 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2618,739,185 - 18,766,762 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02617,379,223 - 17,407,390 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2617,380,903 - 17,406,205 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12618,948,385 - 18,974,803 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02617,369,622 - 17,397,271 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02617,387,029 - 17,414,680 (-)NCBIUU_Cfam_GSD_1.0
PIWIL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1442,835,302 - 42,869,566 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11442,834,819 - 42,869,486 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21445,566,922 - 45,600,516 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIWIL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1197,826,068 - 7,866,064 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl197,826,757 - 7,865,934 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045118,012,577 - 118,068,691 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021257340   ⟹   XP_021112999
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474712,587,798 - 12,629,494 (-)NCBI
RefSeq Acc Id: XM_021257341   ⟹   XP_021113000
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474712,587,799 - 12,624,569 (-)NCBI
Protein Sequences
Protein RefSeqs XP_021112999 (Get FASTA)   NCBI Sequence Viewer  
  XP_021113000 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021112999   ⟸   XM_021257340
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021113000   ⟸   XM_021257341
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene Piwil3 ENTREZGENE