Tex264 (testis expressed 264, ER-phagy receptor) - Rat Genome Database

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Gene: Tex264 (testis expressed 264, ER-phagy receptor) Heterocephalus glaber
Analyze
Symbol: Tex264
Name: testis expressed 264, ER-phagy receptor
RGD ID: 18927238
Description: ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN reticulophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: testis expressed 264; testis-expressed protein 264
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,390,747 - 5,416,624 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247305,387,697 - 5,416,924 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Tex264
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,390,747 - 5,416,624 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247305,387,697 - 5,416,924 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
TEX264
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,671,252 - 51,704,323 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,662,693 - 51,704,323 (+)EnsemblGRCh38hg38GRCh38
GRCh37351,705,268 - 51,738,339 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,680,330 - 51,713,377 (+)NCBINCBI36Build 36hg18NCBI36
Build 34351,680,329 - 51,713,377NCBI
Celera351,682,990 - 51,716,106 (+)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef351,767,017 - 51,800,094 (+)NCBIHuRef
CHM1_1351,657,456 - 51,691,164 (+)NCBICHM1_1
T2T-CHM13v2.0351,702,770 - 51,735,833 (+)NCBIT2T-CHM13v2.0
Tex264
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,535,945 - 106,563,151 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,535,945 - 106,563,126 (-)EnsemblGRCm39 Ensembl
GRCm389106,658,746 - 106,685,952 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,658,746 - 106,685,927 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,561,077 - 106,588,279 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369106,516,854 - 106,543,768 (-)NCBIMGSCv36mm8
Celera9106,279,768 - 106,306,773 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.98NCBI
Tex264
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88116,174,517 - 116,201,578 (-)NCBIGRCr8
mRatBN7.28107,295,806 - 107,322,858 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,295,806 - 107,323,232 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,918,785 - 112,945,668 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08111,117,965 - 111,144,848 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,960,741 - 108,987,624 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,360,706 - 115,388,299 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,360,713 - 115,388,266 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,720,830 - 114,748,380 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,852,793 - 111,879,691 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18111,872,248 - 111,899,146 (-)NCBI
Celera8106,607,749 - 106,634,618 (-)NCBICelera
Cytogenetic Map8q32NCBI
Tex264
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,280,372 - 3,305,760 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555323,278,214 - 3,306,045 (+)NCBIChiLan1.0ChiLan1.0
TEX264
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,928,952 - 37,959,382 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,928,953 - 37,955,993 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,908,940 - 37,939,371 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02038,278,078 - 38,308,513 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2038,251,904 - 38,308,506 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,641,637 - 37,672,065 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02038,050,353 - 38,080,785 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,335,502 - 38,365,938 (-)NCBIUU_Cfam_GSD_1.0
Tex264
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,247,803 - 66,279,040 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,008,056 - 3,039,562 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,008,355 - 3,039,537 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TEX264
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1333,897,638 - 33,924,177 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11333,892,557 - 33,924,175 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,080,118 - 37,127,975 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TEX264
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,008,961 - 13,042,296 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,012,079 - 13,041,993 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041153,913,038 - 153,946,155 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000017611   ⟹   ENSHGLP00000017437
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247305,390,747 - 5,416,624 (+)Ensembl
RefSeq Acc Id: XM_004834171   ⟹   XP_004834228
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247305,387,697 - 5,416,924 (+)NCBI
RefSeq Acc Id: XM_013070439   ⟹   XP_012925893
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247305,388,106 - 5,416,924 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004834228 (Get FASTA)   NCBI Sequence Viewer  
  XP_012925893 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000017437
Reference Protein Sequences
RefSeq Acc Id: XP_004834228   ⟸   XM_004834171
- UniProtKB: G5BZU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012925893   ⟸   XM_013070439
- UniProtKB: G5BZU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000017437   ⟸   ENSHGLT00000017611


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012490 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000017611 ENTREZGENE
Gene3D-CATH Regulatory factor, effector binding domain UniProtKB/TrEMBL
InterPro Reg_factor_effector_dom_sf UniProtKB/TrEMBL
NCBI Gene Tex264 ENTREZGENE
PANTHER TESTIS-EXPRESSED PROTEIN 264 UniProtKB/TrEMBL
  TESTIS-EXPRESSED PROTEIN 264 UniProtKB/TrEMBL
Superfamily-SCOP Probable bacterial effector-binding domain UniProtKB/TrEMBL
UniProt G5BZU3 ENTREZGENE, UniProtKB/TrEMBL