Slc2a5 (solute carrier family 2 member 5) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Slc2a5 (solute carrier family 2 member 5) Heterocephalus glaber
Analyze
Symbol: Slc2a5
Name: solute carrier family 2 member 5
RGD ID: 18927187
Description: ENCODES a protein that exhibits fructose binding (ortholog); fructose transmembrane transporter activity (ortholog); glucose transmembrane transporter activity (ortholog); INVOLVED IN cellular response to fructose stimulus (ortholog); fructose import across plasma membrane (ortholog); fructose transmembrane transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); chromosome 1p36 deletion syndrome (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (inferred); membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Solute carrier family 2, facilitated glucose transporter member 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248183,135,422 - 3,155,698 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248183,132,345 - 3,156,184 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc2a5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248183,135,422 - 3,155,698 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248183,132,345 - 3,156,184 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
SLC2A5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3819,035,106 - 9,094,195 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl19,035,106 - 9,088,478 (-)EnsemblGRCh38hg38GRCh38
GRCh3719,095,165 - 9,132,318 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3619,019,594 - 9,052,257 (-)NCBINCBI36Build 36hg18NCBI36
Build 3419,031,272 - 9,063,936NCBI
Celera18,205,681 - 8,257,881 (-)NCBICelera
Cytogenetic Map1p36.23NCBI
HuRef18,246,781 - 8,279,898 (-)NCBIHuRef
CHM1_119,086,735 - 9,120,070 (-)NCBICHM1_1
T2T-CHM13v2.018,568,756 - 8,627,452 (-)NCBIT2T-CHM13v2.0
Slc2a5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394150,203,801 - 150,228,625 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4150,203,740 - 150,228,626 (+)EnsemblGRCm39 Ensembl
GRCm384150,119,344 - 150,144,168 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,119,283 - 150,144,169 (+)EnsemblGRCm38mm10GRCm38
MGSCv374149,493,453 - 149,518,277 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364148,963,144 - 148,987,968 (+)NCBIMGSCv36mm8
Celera4152,395,331 - 152,418,947 (+)NCBICelera
Cytogenetic Map4E2NCBI
cM Map480.97NCBI
Slc2a5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85165,857,412 - 165,892,928 (+)NCBIGRCr8
mRatBN7.25160,583,055 - 160,609,994 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5160,583,234 - 160,611,106 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5163,299,711 - 163,326,461 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05165,121,924 - 165,148,813 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,078,270 - 165,105,019 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05167,142,182 - 167,174,203 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5167,141,875 - 167,174,310 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05170,782,871 - 170,808,467 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45167,240,442 - 167,285,761 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15167,250,629 - 167,295,948 (+)NCBI
Celera5158,844,838 - 158,869,525 (+)NCBICelera
Cytogenetic Map5q36NCBI
Slc2a5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554864,194,833 - 4,211,377 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554864,194,568 - 4,208,568 (+)NCBIChiLan1.0ChiLan1.0
SLC2A5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21219,145,117 - 219,196,791 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11217,789,862 - 217,841,544 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v017,792,361 - 7,840,634 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.119,028,790 - 9,078,509 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl19,028,790 - 9,078,509 (-)Ensemblpanpan1.1panPan2
LOC489640
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1562,417,234 - 62,444,903 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl562,417,591 - 62,442,922 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha562,434,685 - 62,454,581 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0562,644,215 - 62,664,060 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl562,644,215 - 62,664,372 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1562,642,371 - 62,662,203 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0562,506,640 - 62,526,482 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0562,910,582 - 62,930,423 (-)NCBIUU_Cfam_GSD_1.0
Slc2a5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505832,741,273 - 32,767,573 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366233,226,515 - 3,249,914 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366233,226,533 - 3,249,909 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC2A5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl669,507,830 - 69,535,371 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1669,507,829 - 69,535,794 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC2A5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120122,669,220 - 122,714,708 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20122,683,373 - 122,716,540 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605426,700,362 - 26,733,757 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000010401   ⟹   ENSHGLP00000010286
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248183,135,422 - 3,155,698 (+)Ensembl
RefSeq Acc Id: XM_013065214   ⟹   XP_012920668
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248183,132,372 - 3,156,184 (+)NCBI
RefSeq Acc Id: XM_021243563   ⟹   XP_021099222
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248183,132,370 - 3,156,184 (+)NCBI
RefSeq Acc Id: XM_021243564   ⟹   XP_021099223
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248183,132,345 - 3,156,184 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012920668 (Get FASTA)   NCBI Sequence Viewer  
  XP_021099222 (Get FASTA)   NCBI Sequence Viewer  
  XP_021099223 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB16655 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000010286
  ENSHGLP00100018411
GenBank Protein JAO02592 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021099223   ⟸   XM_021243564
- Peptide Label: isoform X2
- UniProtKB: G5C544 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021099222   ⟸   XM_021243563
- Peptide Label: isoform X2
- UniProtKB: G5C544 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_012920668   ⟸   XM_013065214
- Peptide Label: isoform X1
- UniProtKB: A0A0P6JEK5 (UniProtKB/TrEMBL),   G5C544 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000010286   ⟸   ENSHGLT00000010401


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007382 Ensembl, ENTREZGENE
  ENSHGLG00100013574 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000010401 ENTREZGENE
  ENSHGLT00100018603 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro Fru_transpt_5 UniProtKB/TrEMBL
  GLUT UniProtKB/TrEMBL
  MFS_dom UniProtKB/TrEMBL
  MFS_sugar_transport-like UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
  Sugar/inositol_transpt UniProtKB/TrEMBL
  Sugar_transporter_CS UniProtKB/TrEMBL
KEGG Report hgl:101718769 UniProtKB/TrEMBL
NCBI Gene Slc2a5 ENTREZGENE
PANTHER PTHR23503 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER MEMBER 5 UniProtKB/TrEMBL
Pfam Sugar_tr UniProtKB/TrEMBL
PRINTS GLUCTRSPORT5 UniProtKB/TrEMBL
  SUGRTRNSPORT UniProtKB/TrEMBL
PROSITE MFS UniProtKB/TrEMBL
  SUGAR_TRANSPORT_1 UniProtKB/TrEMBL
  SUGAR_TRANSPORT_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/TrEMBL
UniProt A0A0P6JEK5 ENTREZGENE, UniProtKB/TrEMBL
  G5C544 ENTREZGENE, UniProtKB/TrEMBL