Ldlr (Heterocephalus glaber - naked mole-rat) |
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LDLR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 19 | 11,089,463 - 11,133,820 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 11,089,418 - 11,133,820 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 11,200,139 - 11,244,496 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 11,061,132 - 11,105,490 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 11,061,131 - 11,105,490 | NCBI | | | | | Celera | 19 | 11,094,887 - 11,139,322 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.2 | NCBI | | | | | HuRef | 19 | 10,777,128 - 10,820,847 (+) | NCBI | | HuRef | | | CHM1_1 | 19 | 11,201,264 - 11,245,760 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 11,216,460 - 11,260,830 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ldlr (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 21,634,872 - 21,661,215 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 21,634,779 - 21,661,215 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 21,723,576 - 21,749,919 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 21,723,483 - 21,749,919 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 21,528,038 - 21,554,363 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 21,474,180 - 21,498,819 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 18,993,187 - 19,019,513 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | A3 | NCBI | | | | | cM Map | 9 | 7.87 | NCBI | | | | |
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Ldlr (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 28,546,191 - 28,569,075 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 20,270,020 - 20,292,981 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 20,270,041 - 20,294,580 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 24,305,445 - 24,328,327 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 22,600,993 - 22,623,875 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 20,499,706 - 20,522,587 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 22,750,425 - 22,773,305 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 22,750,336 - 22,774,903 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 22,804,325 - 22,827,199 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 20,824,040 - 20,846,920 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 20,824,039 - 20,846,920 (+) | NCBI | | | | | Celera | 8 | 21,660,761 - 21,683,616 (+) | NCBI | | Celera | | | RH 3.4 Map | 8 | 178.16 | RGD | | | | | RH 3.4 Map | 8 | 178.16 | RGD | | | | | Cytogenetic Map | 8 | q13 | NCBI | | | | |
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Ldlr (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955495 | 2,114,434 - 2,138,056 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955495 | 2,114,702 - 2,135,584 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LDLR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 20 | 16,006,932 - 16,050,438 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 15,005,600 - 15,049,123 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 10,640,225 - 10,683,728 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 11,357,311 - 11,402,736 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 11,357,311 - 11,396,791 (+) | Ensembl | panpan1.1 | | panPan2 | |
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LDLR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 50,115,175 - 50,152,443 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 50,048,736 - 50,152,355 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 49,988,705 - 50,026,032 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 50,636,154 - 50,673,474 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 50,636,157 - 50,673,423 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 49,846,492 - 49,883,796 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 50,273,144 - 50,310,479 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 50,515,859 - 50,553,174 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ldlr (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 209,054,161 - 209,095,215 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936659 | 1,259,369 - 1,302,294 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936659 | 1,259,405 - 1,300,545 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LDLR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 69,828,332 - 69,864,827 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 69,828,348 - 69,864,823 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 70,193,426 - 70,206,818 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LDLR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 6 | 10,062,204 - 10,091,780 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 10,062,790 - 10,091,377 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666074 | 9,815,946 - 9,867,321 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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