Gem (Heterocephalus glaber - naked mole-rat) |
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GEM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 94,249,253 - 94,262,319 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 94,249,253 - 94,262,350 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 95,261,481 - 95,274,547 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 95,330,657 - 95,343,733 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 95,330,662 - 95,343,733 | NCBI | | | | | Celera | 8 | 91,447,594 - 91,460,660 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q22.1 | NCBI | | | | | HuRef | 8 | 90,470,565 - 90,483,631 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 95,301,787 - 95,314,853 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 95,374,122 - 95,387,192 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gem (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 11,702,379 - 11,714,993 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 11,704,457 - 11,714,752 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 11,704,447 - 11,714,993 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 11,704,457 - 11,714,752 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 11,631,594 - 11,642,140 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 11,631,604 - 11,641,899 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 11,515,538 - 11,526,084 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | A1 | NCBI | | | | | cM Map | 4 | 5.34 | NCBI | | | | |
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Gem (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 30,011,641 - 30,022,554 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 25,214,309 - 25,225,222 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 25,214,309 - 25,225,222 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 27,339,200 - 27,350,185 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 28,931,944 - 28,942,929 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 28,874,165 - 28,885,140 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 25,339,479 - 25,353,661 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 25,349,928 - 25,353,661 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 30,050,664 - 30,062,666 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 25,809,543 - 26,008,249 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 26,004,470 - 26,008,270 (+) | NCBI | | | | | Celera | 5 | 24,546,414 - 24,557,484 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q13 | NCBI | | | | |
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Gem (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955417 | 10,475,822 - 10,487,825 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955417 | 10,475,967 - 10,486,879 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GEM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 111,582,105 - 111,595,278 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 87,119,098 - 87,132,234 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 90,872,855 - 90,885,969 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 92,817,028 - 92,830,133 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 92,817,028 - 92,830,133 (-) | Ensembl | panpan1.1 | | panPan2 | |
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GEM (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 29 | 39,016,543 - 39,037,761 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 29 | 39,025,483 - 39,037,403 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 29 | 39,177,842 - 39,199,013 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 29 | 39,220,477 - 39,241,164 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 29 | 39,229,312 - 39,239,841 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 29 | 39,234,088 - 39,255,249 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 29 | 39,229,276 - 39,250,433 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 29 | 39,670,894 - 39,692,020 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Gem (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 40,516,800 - 40,530,076 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936544 | 7,262,629 - 7,275,910 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936544 | 7,262,629 - 7,275,860 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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GEM (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 4 | 42,458,466 - 42,471,929 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 42,458,591 - 42,471,941 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 45,876,630 - 45,889,986 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GEM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 89,219,484 - 89,232,788 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 89,218,782 - 89,232,753 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 51,615,735 - 51,629,058 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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