Gck (glucokinase) - Rat Genome Database

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Gene: Gck (glucokinase) Heterocephalus glaber
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Symbol: Gck
Name: glucokinase
RGD ID: 18923423
Description: ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); glucokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); cellular response to glucose starvation (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; forkhead class A signaling pathway; galactokinase deficiency pathway; ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); coronary artery disease (ortholog); diabetes mellitus (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cell cortex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247407,852,390 - 7,886,758 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247407,844,496 - 7,885,900 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gck
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247407,852,390 - 7,886,758 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247407,844,496 - 7,885,900 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
GCK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38744,143,213 - 44,189,439 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl744,143,213 - 44,198,170 (-)EnsemblGRCh38hg38GRCh38
GRCh37744,182,812 - 44,229,038 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36744,150,395 - 44,195,563 (-)NCBINCBI36Build 36hg18NCBI36
Build 34743,957,109 - 43,972,127NCBI
Celera744,281,829 - 44,326,987 (-)NCBICelera
Cytogenetic Map7p13NCBI
HuRef744,069,141 - 44,114,301 (-)NCBIHuRef
CHM1_1744,187,724 - 44,232,886 (-)NCBICHM1_1
T2T-CHM13v2.0744,301,768 - 44,348,026 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2744,223,370 - 44,268,527 (-)NCBI
Gck
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39115,850,816 - 5,900,081 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl115,850,820 - 5,900,081 (-)EnsemblGRCm39 Ensembl
GRCm38115,900,816 - 5,950,081 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl115,900,820 - 5,950,081 (-)EnsemblGRCm38mm10GRCm38
MGSCv37115,800,826 - 5,849,602 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36115,800,826 - 5,849,602 (-)NCBIMGSCv36mm8
Celera116,392,658 - 6,441,626 (-)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.88NCBI
Gck
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81484,999,019 - 85,041,098 (-)NCBIGRCr8
mRatBN7.21480,785,060 - 80,829,842 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1480,785,060 - 80,826,995 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1485,187,142 - 85,229,037 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01486,427,238 - 86,469,134 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01482,876,552 - 82,918,448 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01486,149,146 - 86,191,589 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,148,928 - 86,190,659 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01486,832,735 - 86,875,295 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41486,572,518 - 86,587,723 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11486,591,662 - 86,606,868 (-)NCBI
Celera1479,669,432 - 79,710,739 (-)NCBICelera
Cytogenetic Map14q21NCBI
Gck
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554567,783,760 - 7,842,129 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554567,784,269 - 7,838,260 (+)NCBIChiLan1.0ChiLan1.0
GCK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2649,055,783 - 49,100,854 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1797,380,522 - 97,425,594 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0744,857,604 - 44,903,683 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1744,924,922 - 44,971,365 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl744,926,848 - 44,937,751 (-)Ensemblpanpan1.1panPan2
GCK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha162,080,944 - 2,123,987 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01614,737,904 - 14,781,009 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1614,738,733 - 14,780,998 (+)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.01614,369,169 - 14,412,232 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01614,349,631 - 14,392,705 (+)NCBIUU_Cfam_GSD_1.0
Gck
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511899,892,708 - 99,947,669 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647819,105,361 - 19,158,733 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647819,104,477 - 19,118,915 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GCK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12114,475,723 - 14,523,086 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2114,507,902 - 14,523,850 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660627,992,041 - 8,048,141 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: ENSHGLT00000027164   ⟹   ENSHGLP00000026925
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247407,852,390 - 7,885,083 (+)Ensembl
RefSeq Acc Id: ENSHGLT00000027165   ⟹   ENSHGLP00000026926
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247407,875,838 - 7,886,758 (+)Ensembl
RefSeq Acc Id: XM_004839925   ⟹   XP_004839982
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247407,876,198 - 7,885,083 (+)NCBI
RefSeq Acc Id: XM_021254283   ⟹   XP_021109942
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247407,844,496 - 7,885,900 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004839982 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109942 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB09115 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000026926
  ENSHGLP00100014156
RefSeq Acc Id: XP_021109942   ⟸   XM_021254283
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004839982   ⟸   XM_004839925
- Peptide Label: isoform X1
- UniProtKB: G5BIK4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000026925   ⟸   ENSHGLT00000027164
RefSeq Acc Id: ENSHGLP00000026926   ⟸   ENSHGLT00000027165


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000019150 Ensembl, ENTREZGENE
  ENSHGLG00100010467 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000027165 ENTREZGENE
  ENSHGLT00100014314 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
  3.40.367.20 UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/TrEMBL
  Hexokinase UniProtKB/TrEMBL
  Hexokinase_BS UniProtKB/TrEMBL
  Hexokinase_C UniProtKB/TrEMBL
  Hexokinase_N UniProtKB/TrEMBL
KEGG Report hgl:101721664 UniProtKB/TrEMBL
NCBI Gene Gck ENTREZGENE
PANTHER PTHR19443 UniProtKB/TrEMBL
  PTHR19443:SF3 UniProtKB/TrEMBL
Pfam Hexokinase_1 UniProtKB/TrEMBL
  Hexokinase_2 UniProtKB/TrEMBL
PRINTS HEXOKINASE UniProtKB/TrEMBL
PROSITE HEXOKINASE_1 UniProtKB/TrEMBL
  HEXOKINASE_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53067 UniProtKB/TrEMBL
UniProt G5BIK4 ENTREZGENE, UniProtKB/TrEMBL