Mtarc2 (mitochondrial amidoxime reducing component 2) - Rat Genome Database

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Gene: Mtarc2 (mitochondrial amidoxime reducing component 2) Heterocephalus glaber
Analyze
Symbol: Mtarc2
Name: mitochondrial amidoxime reducing component 2
RGD ID: 18922814
Description: ENCODES a protein that exhibits molybdenum ion binding (ortholog); molybdopterin cofactor binding (ortholog); nitrate reductase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); nitrate metabolic process (ortholog); nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); amphetamine abuse (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Marc2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248354,146,766 - 4,163,430 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248354,146,910 - 4,163,292 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mtarc2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248354,146,766 - 4,163,430 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248354,146,910 - 4,163,292 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MTARC2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381220,748,322 - 220,784,815 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1220,748,225 - 220,784,815 (+)EnsemblGRCh38hg38GRCh38
GRCh371220,921,664 - 220,958,157 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361218,988,299 - 219,024,222 (+)NCBINCBI36Build 36hg18NCBI36
Celera1194,141,035 - 194,176,957 (+)NCBICelera
Cytogenetic Map1q41NCBI
HuRef1191,596,292 - 191,632,216 (+)NCBIHuRef
CHM1_11222,194,135 - 222,230,058 (+)NCBICHM1_1
T2T-CHM13v2.01219,988,028 - 220,024,522 (+)NCBIT2T-CHM13v2.0
Mtarc2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391184,545,263 - 184,579,266 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1184,545,265 - 184,578,648 (-)EnsemblGRCm39 Ensembl
GRCm381184,813,066 - 184,846,451 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1184,813,068 - 184,846,451 (-)EnsemblGRCm38mm10GRCm38
MGSCv371186,636,947 - 186,669,726 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361186,513,856 - 186,546,635 (-)NCBIMGSCv36mm8
Celera1191,775,533 - 191,808,292 (-)NCBICelera
Cytogenetic Map1H5NCBI
cM Map189.12NCBI
Mtarc2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81398,894,347 - 98,928,754 (-)NCBIGRCr8
mRatBN7.21396,362,810 - 96,397,284 (-)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1398,871,474 - 98,903,474 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.013100,270,651 - 100,302,312 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01397,453,707 - 97,485,716 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013102,724,266 - 102,755,511 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13102,724,348 - 102,756,174 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013107,401,548 - 107,432,904 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413100,809,306 - 100,838,648 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.113100,998,348 - 101,027,691NCBI
Celera1395,883,189 - 95,914,342 (-)NCBICelera
Cytogenetic Map13q26NCBI
MTARC2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2128,615,340 - 28,654,642 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1128,577,172 - 28,616,492 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01196,333,803 - 196,371,147 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11201,368,306 - 201,405,602 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1201,369,424 - 201,405,602 (+)Ensemblpanpan1.1panPan2
MTARC2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13815,426,884 - 15,451,701 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3815,426,666 - 15,451,136 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3815,457,261 - 15,493,511 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03815,451,758 - 15,487,926 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3815,451,494 - 15,522,862 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13815,459,348 - 15,495,474 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03815,813,447 - 15,849,915 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03816,106,377 - 16,142,896 (+)NCBIUU_Cfam_GSD_1.0
Mtarc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934456,258,120 - 56,295,420 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366501,506,329 - 1,543,712 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366501,506,471 - 1,543,532 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTARC2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1010,156,728 - 10,189,924 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11010,156,732 - 10,194,371 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21012,363,633 - 12,387,601 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MTARC2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1258,745,754 - 8,782,967 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl258,748,605 - 8,782,379 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660559,029,599 - 9,066,624 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004867406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01085227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSHGLT00000026915   ⟹   ENSHGLP00000026678
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248354,146,766 - 4,163,430 (+)Ensembl
RefSeq Acc Id: ENSHGLT00000026916   ⟹   ENSHGLP00000026679
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248354,146,925 - 4,163,430 (+)Ensembl
RefSeq Acc Id: XM_004867406   ⟹   XP_004867463
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248354,146,910 - 4,163,292 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004867463 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000026678
Reference Protein Sequences
RefSeq Acc Id: XP_004867463   ⟸   XM_004867406
RefSeq Acc Id: ENSHGLP00000026679   ⟸   ENSHGLT00000026916
RefSeq Acc Id: ENSHGLP00000026678   ⟸   ENSHGLT00000026915


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000018981 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000026915 ENTREZGENE
NCBI Gene Mtarc2 ENTREZGENE