CUNH19orf44 (chromosome unknown C19orf44 homolog) - Rat Genome Database

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Gene: CUNH19orf44 (chromosome unknown C19orf44 homolog) Heterocephalus glaber
Analyze
Symbol: CUNH19orf44
Name: chromosome unknown C19orf44 homolog
RGD ID: 18922572
Description: ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein C19orf44 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624908937,199 - 949,594 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
CUNH19orf44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624908937,199 - 949,594 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
C19orf44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381916,496,394 - 16,521,352 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1916,496,394 - 16,521,352 (+)EnsemblGRCh38hg38GRCh38
GRCh371916,607,205 - 16,632,163 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361916,468,205 - 16,493,163 (+)NCBINCBI36Build 36hg18NCBI36
Celera1916,509,042 - 16,534,003 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1916,175,706 - 16,200,749 (+)NCBIHuRef
CHM1_11916,606,686 - 16,631,648 (+)NCBICHM1_1
T2T-CHM13v2.01916,631,180 - 16,656,141 (+)NCBIT2T-CHM13v2.0
1700030K09Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39873,197,724 - 73,214,385 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl873,197,724 - 73,214,845 (+)EnsemblGRCm39 Ensembl
GRCm38872,443,880 - 72,460,541 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl872,443,880 - 72,461,001 (+)EnsemblGRCm38mm10GRCm38
MGSCv37874,967,779 - 74,984,440 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36875,372,915 - 75,389,530 (+)NCBIMGSCv36mm8
Celera876,782,393 - 76,803,189 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map835.08NCBI
C16h19orf44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81617,414,041 - 17,430,108 (-)NCBIGRCr8
mRatBN7.21617,379,999 - 17,396,088 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1617,380,003 - 17,396,002 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1617,448,533 - 17,464,527 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01618,579,685 - 18,595,699 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01617,501,453 - 17,517,447 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01619,081,329 - 19,097,329 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1619,081,333 - 19,097,329 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01618,944,080 - 18,960,080 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41617,798,175 - 17,814,175 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11617,798,173 - 17,814,173 (-)NCBI
Celera1617,599,777 - 17,615,780 (-)NCBICelera
Cytogenetic Map16p14NCBI
LOC102026345
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555241,235,137 - 1,245,526 (-)NCBIChiLan1.0ChiLan1.0
C20H19orf44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22021,368,959 - 21,394,108 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11920,375,015 - 20,400,180 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01915,986,955 - 16,011,991 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11916,965,343 - 16,991,670 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1916,970,877 - 16,987,604 (+)Ensemblpanpan1.1panPan2
C20H19orf44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12046,019,750 - 46,039,201 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2046,020,441 - 46,037,713 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2045,933,824 - 45,953,374 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02046,507,333 - 46,526,860 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2046,507,340 - 46,526,419 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12045,742,522 - 45,762,020 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02046,153,286 - 46,172,813 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02046,428,598 - 46,448,362 (-)NCBIUU_Cfam_GSD_1.0
CUNH19orf44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118204,545,718 - 204,571,073 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365964,092,974 - 4,120,153 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365964,095,441 - 4,120,127 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C2H19orf44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl261,081,452 - 61,105,091 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1261,076,623 - 61,105,142 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2260,664,710 - 60,674,792 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH19orf44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1615,007,289 - 15,028,062 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660744,440,248 - 4,464,753 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004873275   ⟹   XP_004873332
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908937,199 - 949,513 (-)NCBI
RefSeq Acc Id: XM_004873276   ⟹   XP_004873333
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908937,199 - 949,513 (-)NCBI
RefSeq Acc Id: XM_021251075   ⟹   XP_021106734
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908937,470 - 949,513 (-)NCBI
RefSeq Acc Id: XM_021251076   ⟹   XP_021106735
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908937,470 - 949,594 (-)NCBI
RefSeq Acc Id: XM_021251077   ⟹   XP_021106736
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908937,470 - 949,376 (-)NCBI
RefSeq Acc Id: XM_021251078   ⟹   XP_021106737
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908938,685 - 949,513 (-)NCBI
RefSeq Acc Id: XR_002391792
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624908937,199 - 949,513 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_004873333   ⟸   XM_004873276
- Peptide Label: isoform X3
- UniProtKB: G5C2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004873332   ⟸   XM_004873275
- Peptide Label: isoform X2
- UniProtKB: G5C2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106735   ⟸   XM_021251076
- Peptide Label: isoform X1
- UniProtKB: G5C2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106734   ⟸   XM_021251075
- Peptide Label: isoform X1
- UniProtKB: G5C2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106736   ⟸   XM_021251077
- Peptide Label: isoform X1
- UniProtKB: G5C2V9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106737   ⟸   XM_021251078
- Peptide Label: isoform X4
- UniProtKB: G5C2V9 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000003381 ENTREZGENE
Ensembl Transcript ENSHGLT00000004681 ENTREZGENE
InterPro C19orf44-like UniProtKB/TrEMBL
  DUF4614 UniProtKB/TrEMBL
NCBI Gene CUNH19orf44 ENTREZGENE
PANTHER DUF4614 DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam DUF4614 UniProtKB/TrEMBL
UniProt G5C2V9 ENTREZGENE, UniProtKB/TrEMBL