Ptger2 (prostaglandin E receptor 2) - Rat Genome Database

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Gene: Ptger2 (prostaglandin E receptor 2) Heterocephalus glaber
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Symbol: Ptger2
Name: prostaglandin E receptor 2
RGD ID: 18922321
Description: ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to prostaglandin E stimulus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma, nasal polyps, and aspirin intolerance (ortholog); endometriosis (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: prostaglandin E2 receptor EP2 subtype
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,726,975 - 16,741,557 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,729,846 - 16,741,529 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ptger2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,726,975 - 16,741,557 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,729,846 - 16,741,529 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PTGER2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,314,312 - 52,328,598 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1452,314,305 - 52,328,598 (+)EnsemblGRCh38hg38GRCh38
GRCh371452,781,030 - 52,795,316 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361451,850,863 - 51,865,074 (+)NCBINCBI36Build 36hg18NCBI36
Build 341451,850,862 - 51,865,070NCBI
Celera1432,648,601 - 32,662,908 (+)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1432,941,341 - 32,955,648 (+)NCBIHuRef
CHM1_11452,720,192 - 52,734,499 (+)NCBICHM1_1
T2T-CHM13v2.01446,521,407 - 46,535,692 (+)NCBIT2T-CHM13v2.0
Ptger2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,225,568 - 45,241,277 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,225,652 - 45,241,277 (+)EnsemblGRCm39 Ensembl
GRCm381444,988,111 - 45,003,820 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1444,988,195 - 45,003,820 (+)EnsemblGRCm38mm10GRCm38
MGSCv371445,607,786 - 45,623,495 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361443,910,468 - 43,925,027 (+)NCBIMGSCv36mm8
Celera1441,179,301 - 41,195,008 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.68NCBI
Ptger2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81520,694,765 - 20,708,475 (+)NCBIGRCr8
mRatBN7.21518,215,013 - 18,228,714 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,217,285 - 18,228,714 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,008,805 - 21,020,249 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01521,965,749 - 21,977,190 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,222,303 - 20,233,747 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,336,029 - 19,349,759 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,338,175 - 19,350,210 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,301,463 - 23,315,207 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41520,205,443 - 20,216,872 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11520,878,084 - 20,889,615 (+)NCBI
Celera1518,649,190 - 18,660,619 (+)NCBICelera
Cytogenetic Map15p14NCBI
Ptger2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,757,888 - 10,774,688 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,760,801 - 10,775,197 (-)NCBIChiLan1.0ChiLan1.0
PTGER2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21553,441,812 - 53,459,334 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11452,661,559 - 52,676,942 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01432,910,755 - 32,926,138 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11451,195,381 - 51,209,686 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,195,381 - 51,209,686 (+)Ensemblpanpan1.1panPan2
PTGER2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1828,523,318 - 28,536,936 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl828,522,681 - 28,536,922 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha828,274,789 - 28,288,408 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0828,698,142 - 28,712,635 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl828,699,025 - 28,712,635 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1828,369,315 - 28,383,055 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0828,428,898 - 28,442,522 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0828,777,540 - 28,791,160 (+)NCBIUU_Cfam_GSD_1.0
Ptger2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,666,763 - 76,679,725 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366972,440,901 - 2,453,975 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366972,440,943 - 2,453,897 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTGER2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1181,994,560 - 182,009,953 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11181,993,961 - 182,009,959 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,268,089 - 202,282,621 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PTGER2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,395,799 - 29,410,723 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,396,464 - 29,409,575 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605317,664,018 - 17,678,316 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Sequence


Ensembl Acc Id: ENSHGLT00000015685   ⟹   ENSHGLP00000015521
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473116,726,975 - 16,741,557 (-)Ensembl
RefSeq Acc Id: XM_004835535   ⟹   XP_004835592
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,729,846 - 16,741,529 (-)NCBI
RefSeq Acc Id: XM_021262262   ⟹   XP_021117921
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,729,846 - 16,741,529 (-)NCBI
RefSeq Acc Id: XR_002396669
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473116,730,628 - 16,741,529 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004835592 (Get FASTA)   NCBI Sequence Viewer  
  XP_021117921 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000015521
RefSeq Acc Id: XP_021117921   ⟸   XM_021262262
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004835592   ⟸   XM_004835535
- Peptide Label: isoform X1
Ensembl Acc Id: ENSHGLP00000015521   ⟸   ENSHGLT00000015685


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000011102 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000015685 ENTREZGENE
NCBI Gene Ptger2 ENTREZGENE