Eogt (EGF domain specific O-linked N-acetylglucosamine transferase) - Rat Genome Database

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Gene: Eogt (EGF domain specific O-linked N-acetylglucosamine transferase) Heterocephalus glaber
Analyze
Symbol: Eogt
Name: EGF domain specific O-linked N-acetylglucosamine transferase
RGD ID: 18922312
Description: ENCODES a protein that exhibits glycosyltransferase activity (inferred); protein O-acetylglucosaminyltransferase activity (inferred); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 4 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum lumen (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: EGF domain-specific O-linked N-acetylglucosamine transferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247733,534,833 - 3,582,752 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247733,536,059 - 3,582,847 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Eogt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247733,534,833 - 3,582,752 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247733,536,059 - 3,582,847 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
EOGT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38368,975,225 - 69,013,684 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl368,975,217 - 69,013,684 (-)EnsemblGRCh38hg38GRCh38
GRCh37369,024,376 - 69,062,835 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36369,107,058 - 69,145,464 (-)NCBINCBI36Build 36hg18NCBI36
Celera368,952,460 - 68,990,886 (-)NCBICelera
Cytogenetic Map3p14.1NCBI
HuRef369,025,405 - 69,064,100 (-)NCBIHuRef
CHM1_1368,967,096 - 69,014,262 (-)NCBICHM1_1
T2T-CHM13v2.0369,011,970 - 69,050,451 (-)NCBIT2T-CHM13v2.0
Eogt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39697,086,977 - 97,128,445 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl697,086,985 - 97,126,143 (-)EnsemblGRCm39 Ensembl
GRCm38697,110,016 - 97,151,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl697,110,024 - 97,149,182 (-)EnsemblGRCm38mm10GRCm38
MGSCv37697,060,938 - 97,098,877 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36697,076,407 - 97,114,346 (-)NCBIMGSCv36mm8
Celera698,971,682 - 99,007,964 (-)NCBICelera
Cytogenetic Map6D3NCBI
cM Map644.88NCBI
Eogt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84131,275,587 - 131,313,243 (-)NCBIGRCr8
mRatBN7.24129,718,897 - 129,756,558 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4129,718,901 - 129,756,445 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4135,145,672 - 135,181,170 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04130,926,712 - 130,962,211 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04129,544,671 - 129,580,156 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04129,477,779 - 129,515,435 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4129,477,807 - 129,515,435 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04193,981,263 - 194,019,171 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44131,833,304 - 131,869,461 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14132,078,144 - 132,114,302 (-)NCBI
Celera4118,596,974 - 118,632,628 (-)NCBICelera
Cytogenetic Map4q34NCBI
Eogt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542118,846,420 - 18,879,985 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542118,845,626 - 18,879,008 (+)NCBIChiLan1.0ChiLan1.0
EOGT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2268,929,882 - 68,969,526 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1368,935,557 - 68,975,490 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0368,910,100 - 68,950,816 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1370,277,052 - 70,317,471 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl370,277,450 - 70,317,465 (-)Ensemblpanpan1.1panPan2
EOGT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12022,722,142 - 22,757,188 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2022,722,919 - 22,757,136 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2022,700,472 - 22,730,866 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02022,748,283 - 22,784,106 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2022,748,323 - 22,784,097 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12022,445,490 - 22,476,039 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02022,788,996 - 22,819,398 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02022,859,033 - 22,889,647 (+)NCBIUU_Cfam_GSD_1.0
Eogt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049421,608,350 - 1,637,435 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366031,612,510 - 1,636,291 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366031,608,173 - 1,638,052 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EOGT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1350,396,629 - 50,436,199 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11350,396,625 - 50,436,218 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21355,478,584 - 55,518,845 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EOGT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12230,002,069 - 30,040,851 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2229,999,914 - 30,035,877 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041136,752,774 - 136,790,465 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000020818   ⟹   ENSHGLP00000020616
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247733,534,833 - 3,582,752 (-)Ensembl
RefSeq Acc Id: XM_004854177   ⟹   XP_004854234
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247733,536,059 - 3,582,846 (-)NCBI
RefSeq Acc Id: XM_013075651   ⟹   XP_012931105
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247733,536,059 - 3,582,847 (-)NCBI
RefSeq Acc Id: XM_013075652   ⟹   XP_012931106
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247733,536,059 - 3,581,501 (-)NCBI
RefSeq Acc Id: XM_021266023   ⟹   XP_021121682
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247733,536,059 - 3,582,584 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004854234 (Get FASTA)   NCBI Sequence Viewer  
  XP_012931105 (Get FASTA)   NCBI Sequence Viewer  
  XP_012931106 (Get FASTA)   NCBI Sequence Viewer  
  XP_021121682 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB01119 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000020616
  ENSHGLP00100022518
GenBank Protein JAN98004 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_012931105   ⟸   XM_013075651
- Peptide Label: isoform X1
RefSeq Acc Id: XP_004854234   ⟸   XM_004854177
- Peptide Label: isoform X2
- UniProtKB: G5AVQ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121682   ⟸   XM_021266023
- Peptide Label: isoform X1
RefSeq Acc Id: XP_012931106   ⟸   XM_013075652
- Peptide Label: isoform X1
RefSeq Acc Id: ENSHGLP00000020616   ⟸   ENSHGLT00000020818


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014748 Ensembl, ENTREZGENE
  ENSHGLG00100016560 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000020818 ENTREZGENE
  ENSHGLT00100022751 UniProtKB/TrEMBL
InterPro Glyco_transf_61_cat UniProtKB/TrEMBL
  Glycosyltransferase_61 UniProtKB/TrEMBL
KEGG Report hgl:101715607 UniProtKB/TrEMBL
NCBI Gene Eogt ENTREZGENE
PANTHER EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE UniProtKB/TrEMBL
  PTHR20961 UniProtKB/TrEMBL
Pfam DUF563 UniProtKB/TrEMBL
UniProt G5AVQ8 ENTREZGENE, UniProtKB/TrEMBL