Slc17a2 (solute carrier family 17 member 2) - Rat Genome Database

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Gene: Slc17a2 (solute carrier family 17 member 2) Heterocephalus glaber
Analyze
Symbol: Slc17a2
Name: solute carrier family 17 member 2
RGD ID: 18920992
Description: ENCODES a protein that exhibits transmembrane transporter activity (inferred); urate transmembrane transporter activity (inferred); INVOLVED IN monoatomic anion transport (inferred); transmembrane transport (inferred); urate transport (inferred); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); liver cirrhosis (ortholog); FOUND IN apical plasma membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Sodium-dependent phosphate transport protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247561,088,943 - 1,106,509 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247561,088,919 - 1,119,361 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Slc17a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247561,088,943 - 1,106,509 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247561,088,919 - 1,119,361 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
SLC17A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38625,912,754 - 25,930,691 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl625,912,754 - 25,930,691 (-)EnsemblGRCh38hg38GRCh38
GRCh37625,912,982 - 25,930,919 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36626,020,961 - 26,038,818 (-)NCBINCBI36Build 36hg18NCBI36
Build 34626,020,964 - 26,038,818NCBI
Celera627,140,178 - 27,158,141 (-)NCBICelera
Cytogenetic Map6p22.2NCBI
HuRef625,856,022 - 25,873,987 (-)NCBIHuRef
CHM1_1625,915,216 - 25,933,185 (-)NCBICHM1_1
T2T-CHM13v2.0625,778,573 - 25,796,593 (-)NCBIT2T-CHM13v2.0
Slc17a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391323,990,924 - 24,009,174 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1323,990,976 - 24,009,163 (+)EnsemblGRCm39 Ensembl
GRCm381323,806,941 - 23,825,191 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1323,806,993 - 23,825,180 (+)EnsemblGRCm38mm10GRCm38
MGSCv371323,898,896 - 23,915,394 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361323,814,492 - 23,830,990 (+)NCBIMGSCv36mm8
Celera1324,038,724 - 24,055,222 (+)NCBICelera
Cytogenetic Map13A3.1NCBI
cM Map139.94NCBI
Slc17a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81741,748,195 - 41,767,601 (-)NCBIGRCr8
mRatBN7.21741,318,312 - 41,339,012 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1741,319,701 - 41,336,325 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1741,394,439 - 41,410,347 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01742,998,484 - 43,014,397 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01741,277,169 - 41,293,061 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01743,567,528 - 43,584,228 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,567,528 - 43,584,152 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01745,421,914 - 45,438,592 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,557,119 - 48,573,741 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11748,536,430 - 48,575,608 (+)NCBI
Celera1740,951,177 - 40,967,800 (-)NCBICelera
Cytogenetic Map17p11NCBI
Slc17a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554831,185,757 - 1,201,851 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554831,185,775 - 1,201,851 (+)NCBIChiLan1.0ChiLan1.0
SLC17A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2540,558,561 - 40,576,490 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1636,560,004 - 36,577,945 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0625,746,100 - 25,764,029 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1626,404,154 - 26,421,989 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl626,404,163 - 26,421,879 (-)Ensemblpanpan1.1panPan2
SLC17A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13523,839,113 - 23,919,789 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3523,840,934 - 23,853,385 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3523,742,823 - 23,774,994 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03523,956,046 - 24,034,967 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3523,907,888 - 23,972,065 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13523,772,195 - 23,851,213 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03523,823,047 - 23,902,139 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03525,256,073 - 25,334,970 (-)NCBIUU_Cfam_GSD_1.0
Slc17a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049461,788,222 - 1,803,764 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366711,818,052 - 1,829,059 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366711,818,052 - 1,828,993 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC17A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl720,644,244 - 20,663,423 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1720,596,547 - 20,663,498 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC17A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11746,329,330 - 46,342,234 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1746,329,529 - 46,342,657 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604425,844,734 - 25,865,274 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000013588   ⟹   ENSHGLP00000013448
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247561,088,943 - 1,106,509 (+)Ensembl
RefSeq Acc Id: XM_021260517   ⟹   XP_021116176
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,933 - 1,103,710 (+)NCBI
RefSeq Acc Id: XM_021260518   ⟹   XP_021116177
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,929 - 1,104,268 (+)NCBI
RefSeq Acc Id: XM_021260519   ⟹   XP_021116178
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,919 - 1,103,710 (+)NCBI
RefSeq Acc Id: XM_021260520   ⟹   XP_021116179
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,929 - 1,119,361 (+)NCBI
RefSeq Acc Id: XM_021260521   ⟹   XP_021116180
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,928 - 1,103,710 (+)NCBI
RefSeq Acc Id: XM_021260522   ⟹   XP_021116181
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,966 - 1,103,710 (+)NCBI
RefSeq Acc Id: XM_021260523   ⟹   XP_021116182
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247561,088,924 - 1,104,268 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_021116178   ⟸   XM_021260519
- Peptide Label: isoform X1
- UniProtKB: G5BTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116182   ⟸   XM_021260523
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021116180   ⟸   XM_021260521
- Peptide Label: isoform X1
- UniProtKB: G5BTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116179   ⟸   XM_021260520
- Peptide Label: isoform X1
- UniProtKB: G5BTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116177   ⟸   XM_021260518
- Peptide Label: isoform X1
- UniProtKB: G5BTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116176   ⟸   XM_021260517
- Peptide Label: isoform X1
- UniProtKB: G5BTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021116181   ⟸   XM_021260522
- Peptide Label: isoform X1
- UniProtKB: G5BTY1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000013448   ⟸   ENSHGLT00000013588


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000009615 Ensembl, ENTREZGENE
  ENSHGLG00100003627 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000013588 ENTREZGENE
  ENSHGLT00100004855 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro MFS UniProtKB/TrEMBL
  MFS_dom UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
KEGG Report hgl:101712249 UniProtKB/TrEMBL
NCBI Gene Slc17a2 ENTREZGENE
PANTHER SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 3 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 17 UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/TrEMBL
PROSITE MFS UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/TrEMBL
UniProt G5BTY1 ENTREZGENE, UniProtKB/TrEMBL