Soat1 (Heterocephalus glaber - naked mole-rat) |
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SOAT1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 179,293,797 - 179,358,680 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 179,293,714 - 179,358,680 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 179,262,932 - 179,327,815 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 177,529,640 - 177,591,076 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 175,994,673 - 176,056,109 | NCBI | | | | | Celera | 1 | 152,371,279 - 152,432,730 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q25.2 | NCBI | | | | | HuRef | 1 | 150,490,026 - 150,555,022 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 180,686,373 - 180,751,320 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 178,648,799 - 178,713,729 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Soat1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 156,255,678 - 156,301,898 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 156,252,095 - 156,301,901 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 156,428,108 - 156,474,328 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 156,424,525 - 156,474,331 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 158,358,239 - 158,404,459 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 158,265,149 - 158,310,920 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 158,822,751 - 158,868,673 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | G3 | NCBI | | | | | cM Map | 1 | 67.71 | NCBI | | | | |
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Soat1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 13 | 71,105,178 - 71,147,776 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 13 | 68,552,274 - 68,597,529 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 68,552,317 - 68,597,494 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 13 | 71,134,597 - 71,176,925 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 72,454,344 - 72,496,807 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 69,715,839 - 69,758,305 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 13 | 74,035,258 - 74,077,759 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 74,035,080 - 74,077,783 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 78,956,528 - 78,999,029 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 13 | 71,420,862 - 71,463,365 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 13 | 71,435,049 - 71,477,553 (-) | NCBI | | | | | Celera | 13 | 68,416,482 - 68,458,206 (-) | NCBI | | Celera | | | Cytogenetic Map | 13 | q22 | NCBI | | | | |
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Soat1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955406 | 18,655,894 - 18,706,891 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955406 | 18,644,351 - 18,708,666 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SOAT1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 70,405,471 - 70,466,287 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 70,065,689 - 70,130,644 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 154,776,305 - 154,840,594 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 158,464,886 - 158,529,952 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 158,464,886 - 158,524,909 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SOAT1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 7 | 20,481,386 - 20,556,706 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 7 | 20,486,069 - 20,546,055 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 20,005,887 - 20,081,197 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 20,217,662 - 20,292,968 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 20,220,698 - 20,293,045 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 7 | 20,126,140 - 20,201,100 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 20,232,924 - 20,307,851 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 20,368,010 - 20,443,005 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Soat1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 91,767,856 - 91,822,797 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936481 | 9,616,850 - 9,669,705 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936481 | 9,614,605 - 9,669,705 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SOAT1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 121,045,234 - 121,113,692 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 121,045,211 - 121,112,393 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 132,895,468 - 132,952,031 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SOAT1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 25 | 49,998,197 - 50,061,433 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 50,001,910 - 50,061,173 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666055 | 51,485,709 - 51,549,654 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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