Cdc25c (cell division cycle 25C) - Rat Genome Database

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Gene: Cdc25c (cell division cycle 25C) Heterocephalus glaber
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Symbol: Cdc25c
Name: cell division cycle 25C
RGD ID: 18920410
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); WW domain binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: M-phase inducer phosphatase 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474331,099,268 - 31,124,262 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474331,099,320 - 31,123,808 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Cdc25c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474331,099,268 - 31,124,262 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474331,099,320 - 31,123,808 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CDC25C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385138,285,265 - 138,338,355 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5138,285,269 - 138,338,355 (-)EnsemblGRCh38hg38GRCh38
GRCh375137,620,954 - 137,674,044 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365137,648,858 - 137,695,415 (-)NCBINCBI36Build 36hg18NCBI36
Build 345137,648,857 - 137,695,415NCBI
Celera5133,741,791 - 133,788,347 (-)NCBICelera
Cytogenetic Map5q31.2NCBI
HuRef5132,811,846 - 132,858,438 (-)NCBIHuRef
CHM1_15137,053,552 - 137,100,241 (-)NCBICHM1_1
T2T-CHM13v2.05138,811,484 - 138,864,572 (-)NCBIT2T-CHM13v2.0
Cdc25c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391834,866,046 - 34,884,644 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1834,866,046 - 34,884,586 (-)EnsemblGRCm39 Ensembl
GRCm381834,732,993 - 34,751,564 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1834,732,993 - 34,751,533 (-)EnsemblGRCm38mm10GRCm38
MGSCv371834,892,651 - 34,911,187 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361834,858,971 - 34,877,482 (-)NCBIMGSCv36mm8
Celera1835,187,375 - 35,205,655 (-)NCBICelera
Cytogenetic Map18B1NCBI
cM Map1818.71NCBI
Cdc25c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81826,608,483 - 26,630,292 (-)NCBIGRCr8
mRatBN7.21826,335,156 - 26,356,199 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1826,335,834 - 26,356,185 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1826,463,197 - 26,483,545 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01827,226,843 - 27,247,181 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01826,561,743 - 26,582,080 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01827,528,768 - 27,550,316 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1827,528,354 - 27,550,224 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01827,242,318 - 27,263,503 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41827,206,537 - 27,225,811 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11827,233,399 - 27,252,447 (-)NCBI
Celera1826,073,642 - 26,093,887 (-)NCBICelera
Cytogenetic Map18p12NCBI
Cdc25c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554182,114,053 - 2,138,513 (+)NCBIChiLan1.0ChiLan1.0
CDC25C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24133,558,666 - 133,616,422 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15131,698,220 - 131,753,241 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05133,663,210 - 133,717,974 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15139,795,138 - 139,843,395 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5139,795,565 - 139,842,698 (-)Ensemblpanpan1.1panPan2
CDC25C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11125,904,152 - 25,940,754 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1125,904,144 - 25,935,744 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1124,673,724 - 24,710,763 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01126,760,225 - 26,797,581 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1126,760,283 - 26,795,431 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11125,467,428 - 25,504,608 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01125,289,991 - 25,327,439 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01125,954,590 - 25,991,631 (-)NCBIUU_Cfam_GSD_1.0
Cdc25c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213154,111,081 - 154,139,934 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365317,471,722 - 7,499,766 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365317,471,722 - 7,499,781 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC25C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2140,289,115 - 140,324,425 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12140,289,156 - 140,323,696 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22145,985,978 - 146,029,991 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDC25C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12340,960,154 - 41,013,016 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2340,960,572 - 41,006,984 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603436,880,690 - 36,929,865 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000010913   ⟹   ENSHGLP00000010791
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474331,099,268 - 31,124,262 (-)Ensembl
RefSeq Acc Id: XM_013071135   ⟹   XP_012926589
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474331,099,322 - 31,123,808 (-)NCBI
RefSeq Acc Id: XM_021255887   ⟹   XP_021111546
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474331,099,322 - 31,123,808 (-)NCBI
RefSeq Acc Id: XM_021255888   ⟹   XP_021111547
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474331,099,321 - 31,123,808 (-)NCBI
RefSeq Acc Id: XM_021255889   ⟹   XP_021111548
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474331,099,320 - 31,123,808 (-)NCBI
RefSeq Acc Id: XM_021255890   ⟹   XP_021111549
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474331,099,322 - 31,123,788 (-)NCBI
Protein Sequences
Protein RefSeqs XP_012926589 (Get FASTA)   NCBI Sequence Viewer  
  XP_021111546 (Get FASTA)   NCBI Sequence Viewer  
  XP_021111547 (Get FASTA)   NCBI Sequence Viewer  
  XP_021111548 (Get FASTA)   NCBI Sequence Viewer  
  XP_021111549 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB06153 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000010791
RefSeq Acc Id: XP_021111548   ⟸   XM_021255889
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021111547   ⟸   XM_021255888
- Peptide Label: isoform X1
RefSeq Acc Id: XP_012926589   ⟸   XM_013071135
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021111546   ⟸   XM_021255887
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021111549   ⟸   XM_021255890
- Peptide Label: isoform X3
- UniProtKB: G5BA42 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000010791   ⟸   ENSHGLT00000010913


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007745 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000010913 ENTREZGENE
Gene3D-CATH 3.40.250.10 UniProtKB/TrEMBL
InterPro MPI_Phosphatase UniProtKB/TrEMBL
  Rhodanese-like_dom UniProtKB/TrEMBL
  Rhodanese-like_dom_sf UniProtKB/TrEMBL
NCBI Gene Cdc25c ENTREZGENE
PANTHER M-PHASE INDUCER PHOSPHATASE 3 UniProtKB/TrEMBL
  M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 UniProtKB/TrEMBL
Pfam Rhodanese UniProtKB/TrEMBL
PRINTS MPIPHPHTASE UniProtKB/TrEMBL
PROSITE RHODANESE_3 UniProtKB/TrEMBL
SMART RHOD UniProtKB/TrEMBL
Superfamily-SCOP SSF52821 UniProtKB/TrEMBL
UniProt A0AAX6SST4_HETGA UniProtKB/TrEMBL
  A0AAX6SSU9_HETGA UniProtKB/TrEMBL
  G5BA42 ENTREZGENE, UniProtKB/TrEMBL