Fam114a2 (family with sequence similarity 114 member A2) - Rat Genome Database

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Gene: Fam114a2 (family with sequence similarity 114 member A2) Heterocephalus glaber
Analyze
Symbol: Fam114a2
Name: family with sequence similarity 114 member A2
RGD ID: 18919373
Description: ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protein FAM114A2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473335,124,597 - 35,153,089 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473335,119,898 - 35,154,903 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
Fam114a2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473335,124,597 - 35,153,089 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473335,119,898 - 35,154,903 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FAM114A2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385153,990,148 - 154,038,910 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5153,990,148 - 154,038,936 (-)EnsemblGRCh38hg38GRCh38
GRCh375153,369,708 - 153,418,470 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365153,351,456 - 153,398,690 (-)NCBINCBI36Build 36hg18NCBI36
Build 345153,351,458 - 153,398,619NCBI
Celera5149,446,797 - 149,494,029 (-)NCBICelera
Cytogenetic Map5q33.2NCBI
HuRef5148,512,203 - 148,559,437 (-)NCBIHuRef
CHM1_15152,803,876 - 152,851,104 (-)NCBICHM1_1
T2T-CHM13v2.05154,523,283 - 154,572,056 (-)NCBIT2T-CHM13v2.0
Fam114a2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391157,373,816 - 57,409,482 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1157,373,819 - 57,409,443 (-)EnsemblGRCm39 Ensembl
GRCm381157,482,990 - 57,518,656 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1157,482,993 - 57,518,617 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,296,492 - 57,332,146 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361157,299,195 - 57,334,810 (-)NCBIMGSCv36mm8
Celera1162,234,821 - 62,270,285 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1135.27NCBI
Fam114a2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81042,162,295 - 42,197,307 (-)NCBIGRCr8
mRatBN7.21041,661,787 - 41,696,790 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1041,661,787 - 41,696,741 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1046,327,532 - 46,362,395 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01045,817,755 - 45,852,619 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01041,321,383 - 41,356,247 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01042,893,579 - 42,933,041 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1042,894,567 - 42,928,461 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01042,701,557 - 42,738,167 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41043,072,744 - 43,106,230 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11043,086,366 - 43,119,864 (-)NCBI
Celera1040,959,592 - 40,994,576 (-)NCBICelera
Cytogenetic Map10q22NCBI
Fam114a2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554088,397,281 - 8,429,502 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554088,396,185 - 8,434,656 (-)NCBIChiLan1.0ChiLan1.0
FAM114A2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24149,194,787 - 149,245,579 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15147,334,253 - 147,385,124 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05149,388,018 - 149,440,434 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15155,387,688 - 155,438,392 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5155,387,688 - 155,438,386 (-)Ensemblpanpan1.1panPan2
FAM114A2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1455,629,241 - 55,662,683 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl455,633,865 - 55,661,487 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha455,520,541 - 55,553,977 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0456,064,021 - 56,097,821 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl456,064,041 - 56,098,751 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1455,893,667 - 55,927,116 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0455,992,803 - 56,026,221 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0456,495,437 - 56,528,886 (+)NCBIUU_Cfam_GSD_1.0
Fam114a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213110,274,221 - 110,306,725 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365158,727,429 - 8,754,081 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365158,723,580 - 8,756,318 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM114A2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1669,121,537 - 69,159,387 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11669,121,515 - 69,159,398 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21675,040,123 - 75,078,047 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FAM114A2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12356,443,108 - 56,495,675 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2356,442,888 - 56,495,642 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603421,168,022 - 21,221,066 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000008121   ⟹   ENSHGLP00000008033
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473335,124,597 - 35,153,089 (+)Ensembl
RefSeq Acc Id: XM_004836535   ⟹   XP_004836592
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473335,120,026 - 35,154,903 (+)NCBI
RefSeq Acc Id: XM_004836536   ⟹   XP_004836593
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473335,119,898 - 35,154,899 (+)NCBI
RefSeq Acc Id: XM_004836537   ⟹   XP_004836594
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473335,120,028 - 35,154,903 (+)NCBI
RefSeq Acc Id: XM_021240855   ⟹   XP_021096514
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473335,120,329 - 35,154,903 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004836592 (Get FASTA)   NCBI Sequence Viewer  
  XP_004836593 (Get FASTA)   NCBI Sequence Viewer  
  XP_004836594 (Get FASTA)   NCBI Sequence Viewer  
  XP_021096514 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000008033
GenBank Protein JAN98201 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004836593   ⟸   XM_004836536
- Peptide Label: isoform X1
- UniProtKB: G5AY12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004836592   ⟸   XM_004836535
- Peptide Label: isoform X1
- UniProtKB: G5AY12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004836594   ⟸   XM_004836537
- Peptide Label: isoform X2
- UniProtKB: A0A0P6J433 (UniProtKB/TrEMBL),   G5AY12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021096514   ⟸   XM_021240855
- Peptide Label: isoform X1
- UniProtKB: G5AY12 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000008033   ⟸   ENSHGLT00000008121


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005817 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000008121 ENTREZGENE
InterPro DUF719 UniProtKB/TrEMBL
NCBI Gene Fam114a2 ENTREZGENE
PANTHER PROTEIN FAM114A2 UniProtKB/TrEMBL
  PTHR12842 UniProtKB/TrEMBL
Pfam DUF719 UniProtKB/TrEMBL
UniProt A0A0P6J433 ENTREZGENE, UniProtKB/TrEMBL
  G5AY12 ENTREZGENE, UniProtKB/TrEMBL