Rnh1 (ribonuclease/angiogenin inhibitor 1) - Rat Genome Database

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Gene: Rnh1 (ribonuclease/angiogenin inhibitor 1) Heterocephalus glaber
Analyze
Symbol: Rnh1
Name: ribonuclease/angiogenin inhibitor 1
RGD ID: 18919007
Description: ENCODES a protein that exhibits ribonuclease inhibitor activity (inferred); INVOLVED IN regulation of angiogenesis (inferred); regulation of inflammatory response (inferred); ASSOCIATED WITH delta beta-thalassemia (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN angiogenin-PRI complex (inferred); cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Ribonuclease inhibitor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476621,951,260 - 21,958,058 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476621,945,412 - 21,956,482 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Rnh1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476621,951,260 - 21,958,058 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476621,945,412 - 21,956,482 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RNH1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811494,515 - 507,242 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11494,512 - 507,300 (-)EnsemblGRCh38hg38GRCh38
GRCh3711494,515 - 507,242 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611484,512 - 497,273 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411484,511 - 497,273NCBI
Celera11556,703 - 569,454 (-)NCBICelera
Cytogenetic Map11p15.5NCBI
HuRef11309,154 - 321,738 (-)NCBIHuRef
CHM1_111493,119 - 505,881 (-)NCBICHM1_1
T2T-CHM13v2.011540,227 - 553,016 (-)NCBIT2T-CHM13v2.0
Rnh1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397140,740,239 - 140,752,764 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7140,740,239 - 140,752,770 (-)EnsemblGRCm39 Ensembl
GRCm387141,160,326 - 141,172,851 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7141,160,326 - 141,172,857 (-)EnsemblGRCm38mm10GRCm38
MGSCv377148,346,225 - 148,358,750 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367141,011,646 - 141,020,004 (-)NCBIMGSCv36mm8
Celera7140,953,170 - 140,965,788 (-)NCBICelera
Cytogenetic Map7F5NCBI
cM Map786.44NCBI
Rnh1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81205,698,882 - 205,711,348 (-)NCBIGRCr8
mRatBN7.21196,269,293 - 196,281,763 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1196,269,293 - 196,281,910 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1204,614,586 - 204,627,128 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,741,437 - 211,753,905 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01204,415,570 - 204,428,035 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01214,151,341 - 214,163,807 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1214,151,338 - 214,163,808 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01221,068,626 - 221,081,346 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41201,358,639 - 201,371,057 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1193,903,213 - 193,915,679 (-)NCBICelera
Cytogenetic Map1q41NCBI
Rnh1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547611,536,378 - 11,549,205 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495547611,543,006 - 11,549,391 (+)NCBIChiLan1.0ChiLan1.0
RNH1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v292,874,089 - 2,886,220 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1112,090,351 - 2,102,573 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011502,203 - 514,342 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111531,303 - 543,449 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11531,303 - 543,014 (-)Ensemblpanpan1.1panPan2
RNH1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11825,604,736 - 25,614,602 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1825,606,029 - 25,614,629 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1825,254,044 - 25,263,727 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01826,189,328 - 26,199,026 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1826,189,332 - 26,254,490 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11825,699,200 - 25,708,870 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01825,343,885 - 25,353,546 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01825,956,275 - 25,965,953 (-)NCBIUU_Cfam_GSD_1.0
Rnh1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947352,495 - 362,493 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936888350,867 - 362,545 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936888352,493 - 362,501 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNH1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2281,928 - 290,079 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12281,919 - 290,522 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RNH1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11305,960 - 321,021 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1305,282 - 321,270 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603897,369,787 - 97,384,022 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000006849   ⟹   ENSHGLP00000006766
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476621,951,260 - 21,958,058 (+)Ensembl
RefSeq Acc Id: XM_004851723   ⟹   XP_004851780
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476621,945,412 - 21,956,482 (+)NCBI
RefSeq Acc Id: XM_004851724   ⟹   XP_004851781
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476621,945,870 - 21,956,482 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004851780 (Get FASTA)   NCBI Sequence Viewer  
  XP_004851781 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB16340 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000006766
  ENSHGLP00100018962
Reference Protein Sequences
RefSeq Acc Id: XP_004851780   ⟸   XM_004851723
- UniProtKB: G5C479 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004851781   ⟸   XM_004851724
- UniProtKB: G5C479 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000006766   ⟸   ENSHGLT00000006849


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004937 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSHGLG00100013992 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000006849 ENTREZGENE, UniProtKB/TrEMBL
  ENSHGLT00100019160 UniProtKB/TrEMBL
Gene3D-CATH Ribonuclease Inhibitor UniProtKB/TrEMBL
InterPro Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_Cys-con_subtyp UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
  LRR_RI_cap UniProtKB/TrEMBL
NCBI Gene Rnh1 ENTREZGENE
PANTHER NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 UniProtKB/TrEMBL
  NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 14 UniProtKB/TrEMBL
Pfam LRR_6 UniProtKB/TrEMBL
  LRR_RI_capping UniProtKB/TrEMBL
PROSITE LRR UniProtKB/TrEMBL
SMART LRR_CC UniProtKB/TrEMBL
  LRR_RI UniProtKB/TrEMBL
Superfamily-SCOP RNI-like UniProtKB/TrEMBL
UniProt G5C479 ENTREZGENE, UniProtKB/TrEMBL