Znf511 (zinc finger protein 511) - Rat Genome Database

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Gene: Znf511 (zinc finger protein 511) Heterocephalus glaber
Analyze
Symbol: Znf511
Name: zinc finger protein 511
RGD ID: 18918654
Description: ASSOCIATED WITH distal 10q deletion syndrome (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473713,432,606 - 13,436,008 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473713,428,543 - 13,436,072 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
Znf511
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473713,432,606 - 13,436,008 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473713,428,543 - 13,436,072 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ZNF511
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810133,308,914 - 133,313,161 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10133,308,914 - 133,313,162 (+)EnsemblGRCh38hg38GRCh38
GRCh3710135,122,418 - 135,126,665 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610134,972,413 - 134,976,656 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410135,011,303 - 135,015,547NCBI
Celera10128,390,111 - 128,394,334 (-)NCBICelera
Cytogenetic Map10q26.3NCBI
HuRef10128,668,302 - 128,672,525 (+)NCBIHuRef
CHM1_110135,403,152 - 135,407,395 (+)NCBICHM1_1
T2T-CHM13v2.010134,263,351 - 134,267,598 (+)NCBIT2T-CHM13v2.0
Zfp511
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397139,616,302 - 139,620,519 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7139,616,304 - 139,620,515 (+)EnsemblGRCm39 Ensembl
GRCm387140,036,390 - 140,040,606 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7140,036,391 - 140,040,602 (+)EnsemblGRCm38mm10GRCm38
MGSCv377147,222,290 - 147,226,504 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367139,885,974 - 139,891,921 (+)NCBIMGSCv36mm8
Celera7139,834,484 - 139,838,698 (+)NCBICelera
Cytogenetic Map7F4NCBI
cM Map785.03NCBI
Zfp511
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81204,247,349 - 204,251,754 (+)NCBIGRCr8
mRatBN7.21194,817,697 - 194,822,102 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1194,817,697 - 194,822,102 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1203,178,561 - 203,182,968 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01210,313,703 - 210,318,110 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01202,987,536 - 202,991,943 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01212,359,293 - 212,363,698 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,359,177 - 212,363,668 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01219,277,464 - 219,281,869 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41199,821,893 - 199,826,298 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11199,971,947 - 199,976,260 (+)NCBI
Celera1192,495,206 - 192,499,610 (+)NCBICelera
Cytogenetic Map1q41NCBI
Znf511
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547710,932,851 - 10,936,110 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495547710,932,833 - 10,941,562 (+)NCBIChiLan1.0ChiLan1.0
ZNF511
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28145,436,535 - 145,440,777 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110145,441,892 - 145,446,134 (+)NCBINHGRI_mPanPan1
PanPan1.110134,218,665 - 134,225,253 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10134,221,062 - 134,224,957 (+)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl10134,221,062 - 134,224,957 (+)NCBIpanpan1.1panPan2
ZNF511
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12840,881,819 - 40,885,953 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2840,881,766 - 40,886,090 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2840,937,326 - 40,941,780 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02841,518,407 - 41,522,923 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12841,001,142 - 41,005,596 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02840,990,652 - 40,995,075 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02841,393,279 - 41,397,721 (+)NCBIUU_Cfam_GSD_1.0
Znf511
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244072136,134,661 - 6,138,494 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648619,423,879 - 19,426,339 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648619,422,804 - 19,426,637 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF511
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14141,253,368 - 141,261,064 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114141,253,373 - 141,263,226 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214153,216,316 - 153,221,501 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF511
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12653,157,506 - 53,161,756 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2653,157,406 - 53,162,319 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605441,291,183 - 41,295,448 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000026225   ⟹   ENSHGLP00000025995
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473713,432,606 - 13,436,008 (-)Ensembl
RefSeq Acc Id: XM_004838689   ⟹   XP_004838746
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473713,432,295 - 13,436,071 (-)NCBI
RefSeq Acc Id: XR_204931
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473713,428,543 - 13,436,072 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004838746 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000025995
GenBank Protein JAN98459 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004838746   ⟸   XM_004838689
- UniProtKB: A0A0P6JUP2 (UniProtKB/TrEMBL),   G5AVB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000025995   ⟸   ENSHGLT00000026225


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000018509 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000026225 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro ZNF511 UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report hgl:101700833 UniProtKB/TrEMBL
NCBI Gene Znf511 ENTREZGENE
PANTHER PTHR21354 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 511 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0P6JUP2 ENTREZGENE, UniProtKB/TrEMBL
  G5AVB1 ENTREZGENE, UniProtKB/TrEMBL