Kif4a (kinesin family member 4A) - Rat Genome Database

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Gene: Kif4a (kinesin family member 4A) Heterocephalus glaber
Analyze
Symbol: Kif4a
Name: kinesin family member 4A
RGD ID: 18916477
Description: INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autistic disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN midbody (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Chromosome-associated kinesin KIF4A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
midbody  (ISO)
nucleoplasm  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kif4a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
KIF4A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X70,290,104 - 70,420,886 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX70,290,104 - 70,420,886 (+)EnsemblGRCh38hg38GRCh38
GRCh37X69,509,954 - 69,640,736 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X69,426,620 - 69,557,461 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X69,292,982 - 69,423,696NCBI
CeleraX69,863,214 - 69,994,090 (+)NCBICelera
Cytogenetic MapXq13.1NCBI
HuRefX63,330,793 - 63,462,142 (+)NCBIHuRef
CHM1_1X69,403,837 - 69,534,667 (+)NCBICHM1_1
T2T-CHM13v2.0X68,723,423 - 68,854,206 (+)NCBIT2T-CHM13v2.0
Kif4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X99,669,693 - 99,770,878 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX99,669,343 - 99,770,820 (+)EnsemblGRCm39 Ensembl
GRCm38X100,626,065 - 100,727,271 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX100,625,737 - 100,727,214 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X97,821,404 - 97,922,610 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X96,828,456 - 96,929,658 (+)NCBIMGSCv36mm8
CeleraX87,552,092 - 87,652,016 (+)NCBICelera
Cytogenetic MapXC3NCBI
cM MapX43.72NCBI
Kif4a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X69,761,803 - 69,864,335 (+)NCBIGRCr8
mRatBN7.2X65,721,746 - 65,824,277 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX65,721,779 - 65,824,139 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX67,205,221 - 67,307,660 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X70,705,610 - 70,808,054 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X68,266,513 - 68,368,960 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X70,461,700 - 70,561,084 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX70,461,718 - 70,561,189 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X71,333,326 - 71,432,702 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X88,624,683 - 88,742,447 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X88,780,760 - 88,785,576 (+)NCBI
CeleraX66,080,644 - 66,182,985 (+)NCBICelera
Cytogenetic MapXq22NCBI
Kif4a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554759,845,633 - 9,970,564 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554759,845,633 - 9,969,965 (+)NCBIChiLan1.0ChiLan1.0
KIF4A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X69,967,292 - 70,097,521 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X69,970,894 - 70,101,123 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X59,558,491 - 59,688,711 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X69,617,819 - 69,746,852 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX69,618,244 - 69,746,235 (+)Ensemblpanpan1.1panPan2
KIF4A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X54,739,082 - 54,863,818 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX54,739,419 - 54,863,833 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX45,565,055 - 45,690,257 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X55,705,216 - 55,830,456 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX55,705,342 - 55,830,471 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X53,674,183 - 53,799,369 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X55,005,247 - 55,130,452 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X54,932,168 - 55,057,385 (+)NCBIUU_Cfam_GSD_1.0
Kif4a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X47,299,454 - 47,426,152 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367621,061,526 - 1,187,863 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367621,062,570 - 1,194,192 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF4A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX56,319,529 - 56,447,553 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X56,319,453 - 56,447,560 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X63,514,246 - 63,642,350 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIF4A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X60,135,371 - 60,266,301 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660651,979,926 - 2,110,220 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004872609   ⟹   XP_004872666
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBI
RefSeq Acc Id: XM_013068457   ⟹   XP_012923911
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBI
RefSeq Acc Id: XM_021250514   ⟹   XP_021106173
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624903261,103 - 386,670 (+)NCBI
RefSeq Acc Id: XM_021250515   ⟹   XP_021106174
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBI
RefSeq Acc Id: XM_021250516   ⟹   XP_021106175
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBI
RefSeq Acc Id: XM_021250517   ⟹   XP_021106176
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624903261,084 - 386,670 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_004872666   ⟸   XM_004872609
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021106176   ⟸   XM_021250517
- Peptide Label: isoform X4
RefSeq Acc Id: XP_021106175   ⟸   XM_021250516
- Peptide Label: isoform X3
RefSeq Acc Id: XP_012923911   ⟸   XM_013068457
- Peptide Label: isoform X5
RefSeq Acc Id: XP_021106174   ⟸   XM_021250515
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021106173   ⟸   XM_021250514
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007414 ENTREZGENE
Ensembl Transcript ENSHGLT00000010441 ENTREZGENE
NCBI Gene Kif4a ENTREZGENE